Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_011639.1 Length=13196 Score E Sequences producing significant alignments: (Bits) Value seq1383 194 1e-45 seq283 113 4e-21 >seq1383 Length=104272 Score = 194 bits (214), Expect = 1e-45 Identities = 395/580 (68%), Gaps = 10/580 (2%) Strand=Plus/Plus Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460 || ||| ||| ||| || ||||||||| | ||| ||||||||||||||||| ||| Sbjct 8312 ATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATG 8371 Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520 || |||||||||||||| || ||||| | || |||||||| || || ||||||| ||| Sbjct 8372 TCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTA 8431 Query 8521 CCTCTATTCCATGGATTAACTATGGCTGATGATCT-ACAATCTGTTATAAAGAAGATGTT 8579 || || ||| | || ||||| ||||| || | | || | | || || ||||||||| | Sbjct 8432 CCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCA-CCGTGATCAAGAAGATGAT 8490 Query 8580 AGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATAT 8639 ||| | || | || || |||| | ||| || | | |||| || || || || Sbjct 8491 AGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACAT 8550 Query 8640 TGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAGT 8699 ||||||||||||||||| ||||||||||| | || |||| ||| |||| || Sbjct 8551 CGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGT 8610 Query 8700 AATGGGCCAGTGTTTCGGTCTTCCA-AACTTATTTACACGAACACATGAATTCTTTGAAC 8758 ||||| | | ||| || | ||| |||| ||| | || |||||| | || ||| | Sbjct 8611 GATGGGGAAATTTTTTGGATTACCAGCACTT-TTTTCTCGTACACATCAGTTTTTTAAGG 8669 Query 8759 AAAGTTTGATTTATTATCCTCAAAGAGCTGATTTGATGCACGTTGAAGGCGATACACTAA 8818 ||||||| ||||||| | ||||| | || || ||| | ||| || || ||| | Sbjct 8670 AAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGAAACATT-- 8727 Query 8819 CAAACTC---GTCCGCATCACTGGTGTGTTGGAATGGACAAAAAGGGGGTTTAGAAGGAT 8875 | |||| | | || ||| |||||||||||||| ||| || | |||||| Sbjct 8728 -ATACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGAC 8786 Query 8876 TAAGACAAAAAGGATGGTCAGTATTAAATTATTTAGTTATAGAAAGGGAATCTAGGATAA 8935 | ||||| | || ||| ||||||| |||| |||| || |||| || ||| Sbjct 8787 TCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATAC 8846 Query 8936 GAAACACAAAGGTTAAAGTATTAGCACAAGGGGATAATCA 8975 | || || || || ||| || ||||| || || || Sbjct 8847 GTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCA 8886 Score = 132 bits (146), Expect = 4e-27 Identities = 193/270 (71%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460 || ||||||| ||| || |||| ||| | ||| |||| |||| ||||| | ||| Sbjct 21109 ATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATG 21168 Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520 || |||||||| | |||| ||||| | || || || || || || ||||| | ||| Sbjct 21169 TCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTA 21228 Query 8521 CCTCTATTCCATGGATTAACTATGGCTGATGATCT-ACAATCTGTTATAAAGAAGATGTT 8579 || || || | || ||||||||||| || || | || | | ||||||||||| ||| | Sbjct 21229 CCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTA-CAGTTATAAAGAAAATGAT 21287 Query 8580 AGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATAT 8639 ||| | ||||| || |||||| | ||| || | | |||| |||||||| || Sbjct 21288 AGACAGTTCTCTAGAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCACAT 21347 Query 8640 TGATTATGAAAAATGGAATAATCACCAAAG 8669 ||| ||||| ||||||||||| || ||||| Sbjct 21348 TGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 87.8 bits (96), Expect = 2e-13 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 8439 TGGAAGATTCTTCTCTTTAATGTCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTA 8498 |||| |||| ||||| | | ||| |||||||| | ||||| ||||| | || || || Sbjct 37930 TGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTACTTTGTGATCACGGAATA 37989 Query 8499 CCTTATTAAGGAATATTTTGTTCCTCTATTCCATGGATTAACTATGGCTGATGATCT-AC 8557 || || || ||||| | ||| || || || | || ||||||||||| || || | || Sbjct 37990 TCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCCGACAATATGAC 38049 Query 8558 AATCTGTTATAAAGAAGATGTTAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGT 8617 | |||| || ||||| ||| | || | |||| || ||| | | || ||| Sbjct 38050 CA-CTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGCCTCACGGACTATTCAC 38108 Query 8618 ATGTTTCAATAGCAAATCATATTGATTATGAAAAATGGAATAATCACCAAAG 8669 | | |||| ||||| ||||| || ||||| || ||||| || || ||||| Sbjct 38109 AAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAACCATCAAAG 38160 >seq283 Length=322283 Score = 113 bits (124), Expect = 4e-21 Identities = 248/362 (69%), Gaps = 10/362 (3%) Strand=Plus/Plus Query 8410 AAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATT-CTTCTCTTTAATGTCATGGGA 8468 |||| |||||||||||||| | | || | | |||| ||||||||| ||| ||| Sbjct 271960 AAAGGGAAAGAAAGAGAAATCAGAAAGACAG-ACGATTTCTTCTCTTT---GTCTTGGAC 272015 Query 8469 ACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTTCCTCTATT 8528 | || || ||||| || |||| ||||| || |||||| | | ||||||||| || Sbjct 272016 CTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCCTCTCTT 272075 Query 8529 CCATGGATTAACTATGGCTGATGATCTACAATCTGTTATAAAGAAGATGTTAGAAAATTC 8588 ||||| || | ||| ||||| | ||| ||| ||||||| ||| | || | | | Sbjct 272076 CCATGTTTTGCC-ATGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGACAGTAC 272134 Query 8589 TCAAGGCCAAGGATCTA-ATGATTATGAGTATGTTTCAATAGCAAATCATATTGATTATG 8647 ||| |||||| ||| || | || || ||||| ||| || || || || ||||| | Sbjct 272135 CATAGGACAAGGA-CTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGATTACG 272193 Query 8648 AAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAGTAATGGGCC 8707 |||| |||||||| || ||||| | || | ||| | || ||||| |||||||| Sbjct 272194 AAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAATGGGTA 272253 Query 8708 AGTGTTTCGGTCTTCCAAACTTATT-TACACGAACACATGAATTCTTTGAACAAAGTTTG 8766 | | || || | | || | || ||| || | ||||||||||| ||||||| || Sbjct 272254 AATTCTTTGGATTGGCTAATCTGTTCTACCAGACC-CATGAATTCTTCCAACAAAGCTTT 272312 Query 8767 AT 8768 || Sbjct 272313 AT 272314 Score = 95.1 bits (104), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 8517 TGTTCCTCTATTCCATGGATTAACTATGGCTGATGATCTACAATCTGTTATAAAGAAGAT 8576 ||| ||||| |||||||| || || ||||| ||||| | |||| ||| |||| || || Sbjct 292276 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAAAAA-AT 292334 Query 8577 GTTAGAAAATTCTCAAGGCCAAGGATCTAA-TGATTATGAGTATGTTTCAATAGCAAATC 8635 | | | | | | ||| |||||| ||| | | || ||| ||||| ||| || || | Sbjct 292335 GATGGGCAGTACCACAGGACAAGGA-CTAGGTAACTACGAGCATGTTGGAATTGCTAACC 292393 Query 8636 ATATTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCA 8695 | || ||||| ||||||||||| |||| || |||| |||| ||| | || |||| Sbjct 292394 ACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTCA 292453 Query 8696 AAGTAATGGGCCA 8708 |||||||||| || Sbjct 292454 AAGTAATGGGTCA 292466 Score = 89.7 bits (98), Expect = 4e-14 Identities = 187/272 (69%), Gaps = 9/272 (3%) Strand=Plus/Plus Query 8517 TGTTCCTCTATTCCATGGATTAACTATGGCTGATGATCTACAATCTGTTATAAAGAAGAT 8576 ||| ||||| |||||||| || || ||||| ||||| | ||| ||| ||||||| || Sbjct 273423 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAAAT 273482 Query 8577 GTTAGAAAATTCTCAAGGCCAAGGATCTAA-TGATTATGAGTATGTTTCAATAGCAAATC 8635 | | | | | | ||| |||||| ||| | | || ||| | ||| ||| || || | Sbjct 273483 GATGGGCAGTACCATAGGACAAGGA-CTAGGTAACTACGAGCAGGTTGGAATTGCTAACC 273541 Query 8636 ATATTGATTATGAAAAATGGA-ATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTC 8694 | || ||||| ||||||| || | |||| || |||| ||||| ||| | || ||| Sbjct 273542 ACATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTTC 273601 Query 8695 AAAGTAATGGGCCAGT-GTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTT 8753 ||||||||||| || | ||| | | || || | | | || || |||||||||| Sbjct 273602 AAAGTAATGGGTCAATCCTTTAGATTGGTTAACCTGTTCTGCCAGACCA-ATGAATTCTT 273660 Query 8754 TGAACAAAGTTTGATTTATTATCCTCAAAGAG 8785 ||||||| || || || || ||||||| Sbjct 273661 CCAACAAAGCTTTATATACTA----CAAAGAG 273688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42079788102679