Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_013955.1 Length=15764 Score E Sequences producing significant alignments: (Bits) Value seq1383 141 9e-30 >seq1383 Length=104272 Score = 141 bits (156), Expect = 9e-30 Identities = 419/641 (65%), Gaps = 14/641 (2%) Strand=Plus/Plus Query 10940 CTGAATTCCTCCAAAGAATAAATGACGAAGGTTTGCCCAGGGATTGTCTCGCTATTGGAC 10999 ||| ||| ||| | | || | ||| ||||| ||| || || || | || ||| Sbjct 8259 CTGTATTTCTCAAGAAGATCAGTGAGGAAGGATTGGGTAGAGAAGAGCTGGTAATCGGAT 8318 Query 11000 TCAAAGCAAAAGAAAGAGAAGTAAAGTTAGTTGGAAGGtttttttCTTTAATGACATGGG 11059 | | ||| || |||||||||||||| | ||||| || || ||||| ||| | |||| Sbjct 8319 TAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGG 8378 Query 11060 AACTCAGAGAATATTTCGTATGTACAGAGTATATGATCAAACAGTTCTTCATTCCCCTGT 11119 ||||||||||||| || || |||||||| |||||||| | | | | || || | Sbjct 8379 AACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTACCACTTT 8438 Query 11120 TTCAAGGCCTGACTATGGCTGATGATATGCAAGAGGTCCTTAAAAAATTACTAAGCAGTT 11179 | ||||| | || ||||| || | ||| || | || || | || || | Sbjct 8439 TCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAGCT 8498 Query 11180 CTAGTGGTCAAGGTTTAGACAATTACAACTTGATCTCAATTGCCAATCATTTTGATTATG 11239 | || || || ||| | ||| | ||| |||||||||| || | ||||||| Sbjct 8499 CCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTATG 8558 Query 11240 AAAAATGGAATAATCATCAAAGATATGCTTCAAATTGCCATGTGTTTAAAGTCATGGGAC 11299 |||||||||| ||||| |||||||||| |||| || ||| || | || ||||| Sbjct 8559 AAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTGATGGGGA 8618 Query 11300 AATGTTTTGGTTTACC--CAATCTGTTCCTGCGTACACATGAATTCTTTGAGAAAAGCTT 11357 ||| |||||| ||||| || | | ||| ||||||||| | || ||| || |||| || Sbjct 8619 AATTTTTTGGATTACCAGCACTTTTTTC--TCGTACACATCAGTTTTTTAAGGAAAGTTT 8676 Query 11358 GATCTATTATGCCAAT---AGACCAGATTTGATGATGGTTCAAGGAGATTCTCTCATTAA 11414 | ||||| |||| ||||| || || ||||| | | ||||| | | || Sbjct 8677 AGTTTATTA---CAATGAAAGACCCGACTTAATGATCAGTGATGGAGAAACATT--ATAC 8731 Query 11415 TAGAACAGAGCATAT--GGTATGCTGGGAAGGTCAAAAAGGAGGATTAGAAGGCCTTAGA 11472 | ||| || |||| ||| || ||| | || || |||||| | ||||| || ||| Sbjct 8732 TCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCAGA 8791 Query 11473 CAAAAGGGATGGTCCGGACTTAATTTATTGGTGATTGAGCGTGAAGCAAAAATCCGGAAC 11532 || | || ||| | | || | | || | ||| | ||| ||||| || || Sbjct 8792 CAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTAAT 8851 Query 11533 ACAAAGCTCAAAATTTTGGCACAAGGAGACAATCAAGTTAT 11573 || | || | ||||| ||||||||||| || ||||| Sbjct 8852 ACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTAT 8892 Score = 89.7 bits (98), Expect = 5e-14 Identities = 186/273 (68%), Gaps = 8/273 (3%) Strand=Plus/Plus Query 10993 ATTGGACTCAAAGCAAAAGAAAGAGAAGTAAAGTTAGTTGGAAGGtttttttCTTTAATG 11052 || ||||| | |||||| |||| ||||| || || |||| | ||||| || | ||| Sbjct 21109 ATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATG 21168 Query 11053 ACATGGGAACTCAGAGAATATTTCGTATGTACAGAGTATATGATCAAACAGTTCTTCATT 11112 | |||||||| | | || || || || || ||| | |||||| | | || | Sbjct 21169 TCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTA 21228 Query 11113 CCCCTGTTTCAAGGCCTGACTATGGCTGATGATATG-CAAGAGGTCCTTAAAAAATTACT 11171 || |||||| |||| | |||||||| || ||||| | | || | | ||||| | | Sbjct 21229 CCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGA-T 21287 Query 11172 AAGCAGTTCTAGTGGTCAAGGTTTAGACAATTACAACTT---GATCTCAATTGCCAATCA 11228 | ||||||| | ||||| | || | || ||| |||| |||| || ||||| Sbjct 21288 AGACAGTTCTCTAGAACAAGGACT---CACTGACTACTCCCAGATCACAATCGCAAATCA 21344 Query 11229 TTTTGATTATGAAAAATGGAATAATCATCAAAG 11261 |||| ||||| ||||||||||| |||||||| Sbjct 21345 CATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50291726384287