Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_017685.1 Length=14717 Score E Sequences producing significant alignments: (Bits) Value seq1383 230 2e-56 >seq1383 Length=104272 Score = 230 bits (254), Expect = 2e-56 Identities = 595/895 (66%), Gaps = 14/895 (2%) Strand=Plus/Plus Query 9795 ATTTCTGAAAACAATCAATGATCATGGTTTGGATTGGGAAAAATTAGTAATAGGGTTGAA 9854 |||||| || | |||| ||| | || |||| | | ||| | | ||||| || || | Sbjct 8263 ATTTCTCAAGAAGATCAGTGAGGAAGGATTGGGTAGAGAAGAGCTGGTAATCGGATTAAG 8322 Query 9855 GGCTAAAGAAAGAGAATTAAAAATTGATGGCAGATTCTTCTCATTAATGTCATATGATAT 9914 || || ||||||||| ||||||| || ||||||||||| || ||||| | || | Sbjct 8323 AGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACT 8382 Query 9915 GAGAGATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCAA 9974 ||||| || ||||| || || ||||| ||||| ||| |||| ||||| ||| | ||||| Sbjct 8383 CAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTACCACTTTTCAA 8442 Query 9975 AGGATTAACAATGGCTGATGACCAAAATACTGTTGTCaaaaaaaTGTTAAAAGTATCTAA 10034 ||| ||||||||||| || || | || || |||| || ||| || | || Sbjct 8443 AGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAGCTCCCT 8502 Query 10035 AGGACAGGGCCTGATTGATTACAAAGAGATTACGATCGCTAATCATTTGGATTATGAGAA 10094 |||||||| | | ||| ||| | || | || || || || | |||||||| || Sbjct 8503 GGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTATGAAAA 8562 Query 10095 GTGGAATAACTATCAAAGAAAAGAGTCCAATGGCCCTGTGTTCCGAGTCATGGGTCAATT 10154 ||||| || | |||||| | || || | | |||||| ||| || ||||| |||| Sbjct 8563 ATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTGATGGGGAAATT 8622 Query 10155 TTTGGGCTTACC--TAATTTAATAGAAAGAACTCATGAGTTTTTTGAAAAAAGTCTTATT 10212 ||| || ||||| | ||| | | || ||| |||||||| | ||||| | || Sbjct 8623 TTTTGGATTACCAGCACTTT--TTTCTCGTACACATCAGTTTTTTAAGGAAAGTTTAGTT 8680 Query 10213 TATTACAATGGGAGGCCTGACTTGATGA-CAGTGCGTGGTAAAGAAGTGATCTCAAATAA 10271 |||||||||| || || ||||| |||| ||||| ||| || | | ||| || | Sbjct 8681 TATTACAATGAAAGACCCGACTTAATGATCAGTG-ATGGAGAAACATTATACTCGAAGGA 8739 Query 10272 AGGGGAAGTTGTTTGTTGGGAGGGTCAAAAAGGAGGCTTAGAAGGATTGAGACAAAAAGG 10331 ||| | || |||||| | || || |||||| | |||||| | ||||| | || Sbjct 8740 AGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGG 8799 Query 10332 GTGGAGTGTTCTCAATTGCCTAATGATCGAACGGGAATCAAAGATACGAAATACTCAAAT 10391 ||||||| | | || |||| | | || | |||| || ||||| ||||| | | | Sbjct 8800 GTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTAATACCCGAGT 8859 Query 10392 AGGACTC-TTGGCCCAAGGAGACAATCAAGTAATTACTACTCACTATAAGA-CAGAACCA 10449 | || | ||||| ||||||||||| || || || |||||||||||| | | |||| Sbjct 8860 -GAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACTATAAAATCCCAACCG 8918 Query 10450 TATCA--AACTGAAGAAGAATTACATACGCATATAAACAACATTATTGCAAACAACAATA 10507 | | | |||||||| || | | |||| || | | ||| |||| ||| Sbjct 8919 TTAGAACACCTGAAGAA-AAAAAGCCCCTCATACAAGGAGC--GATTCAGAACACAAATG 8975 Query 10508 AGATAATGGACGCCATATTGGAGGGGACTGAAAAACTAGGACTCAAAATTAATATGGATG 10567 || ||| | || || | || || || | || ||||| | | || |||| || Sbjct 8976 CCATCATGAATGCAGTAGTCGATGGAACAAAGAAGTTAGGATTAATCATCAATAAACGTG 9035 Query 10568 AGACTATCCAAAGTGCAGACTATATAAACTATGGCAAGGTTCCAATTTACAGAGGAAACA 10627 | || || ||| ||||| ||||| || |||||||| || || || | | |||||| | Sbjct 9036 AAACCATACAATCAGCAGATTATATGAATTATGGCAAAGTACCGATCTTCCAAGGAAATA 9095 Query 10628 TATTAGGGTTGAATCAAAAAAGATGGTCAAGGGTTAATTATGTCAGCAATGATCA 10682 | || ||||| | ||| | |||||| | | | ||| | ||||||||| Sbjct 9096 TCTTGCCGTTGATTACTAAACGTGTGTCAAGAATGACCTGTGTGACCAATGATCA 9150 Score = 109 bits (120), Expect = 5e-20 Identities = 178/253 (70%), Gaps = 10/253 (4%) Strand=Plus/Plus Query 9865 AGAGAATTAAAAATTGATGGCAGATTCTTCTCATTAATGTCATATGATATGAGAGATTAT 9924 |||||| | ||||| ||| |||| ||||| | | ||| | || | | || || Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 9925 TTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCAAAGGATTAACA 9984 ||||| || ||||| ||||| || ||| |||||||||| || | || ||||| ||||| Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 9985 ATGGCTGATGACCAAAAT----ACTGTTGTCaaaaaaaTG-TTAAAAGTATCTAAAGGAC 10039 ||||| || ||| || ||||| |||| |||||| || | || |||| |||| Sbjct 38033 ATGGCCGA----CAATATGACCACTGTCATCAAGAAAATGATTGACAG-ATCTCTGGGAC 38087 Query 10040 AGGGCCTGATTGATTACAAAGAGATTACGATCGCTAATCATTTGGATTATGAGAAGTGGA 10099 | |||| | || || | | || || ||||| || ||| | || ||||||||||||| Sbjct 38088 AATGCCTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGA 38147 Query 10100 ATAACTATCAAAG 10112 | ||| ||||||| Sbjct 38148 ACAACCATCAAAG 38160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46943634725080