Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_017714.1 Length=15867 Score E Sequences producing significant alignments: (Bits) Value seq1383 185 9e-43 >seq1383 Length=104272 Score = 185 bits (204), Expect = 9e-43 Identities = 628/962 (65%), Gaps = 36/962 (4%) Strand=Plus/Plus Query 10966 CCTGAATTTCTTAAAAAAGTCAATGATTTTGGATTGGATTGGGA-GAGTTTGGTAATTGG 11024 |||| |||||| || || ||| ||| ||||||| | | || ||| | |||||| || Sbjct 8258 CCTGTATTTCTCAAGAAGATCAGTGAGGAAGGATTGGGTAGAGAAGAGCT-GGTAATCGG 8316 Query 11025 GTTAAAAGCAAAGGAAAGGGAATTGAAGGATGCAGGTAGATTCTTTTCATTGATGAGTTG 11084 |||| ||| |||||||| ||| | || | || |||||||| || |||||| || Sbjct 8317 ATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTG 8376 Query 11085 GGAGTTAAGAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGAACATTTTGTGCCATT 11144 ||| | ||||| || ||||| |||||||||| |||| |||||| ||| ||| ||| | Sbjct 8377 GGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTACCACT 8436 Query 11145 ATTCAAAGGATTAACTATGGCAGATGATCTACAAACTGTAATTAAAAAGATGATTGATGT 11204 |||||||| ||||| ||||| || | | || || || || |||||||| ||| Sbjct 8437 TTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAG 8496 Query 11205 ATCAGCAGGACAAGGT---ACTGAAACCTATGAAAACATAACAATAGCGAATAATATTGA 11261 || ||||| || ||||| || ||| | |||| || || | || || Sbjct 8497 CTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCG---CAATTGCCAACCACATCGA 8553 Query 11262 CTATGAGAAGTGGAATAATTATCAAAGATATGATTCAAATAGTGCAATTTTCACTGTCAT 11321 ||||| || ||||| ||| | ||||||||||| |||| | | |||||||| || Sbjct 8554 TTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTGAT 8613 Query 11322 GGGACAATTTTTAGGGTATCCAAAGTTAATAGCAAGAACTCATGAGTTTTTTGAGAAAAG 11381 ||| ||||||| || | ||| | | | | || ||| |||||||| || |||| Sbjct 8614 GGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTAAGGAAAG 8673 Query 11382 CCTGATCTACTATAATCAGAGACCAGATCTGATGAGAGTTGTTG--GAAATGAGGTAGT- 11438 | | || || ||| | ||||| || | |||| || || |||| || | Sbjct 8674 TTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGAAACATTATACTC 8733 Query 11439 -GAGCATGGACAACAAAAAAGTTGCTTGGGAGGGACAAAAGGGGGGATTAGAAGGTCTGA 11497 || | ||| | || |||| | ||||| || || | ||||| || | Sbjct 8734 GAAGGAAGGA----TATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCA 8789 Query 11498 GACAAAAAGGGTGGAGTGTAGTAAATCTTCTAATGATTGAGAGAGAAGTAAAAATACGAA 11557 |||| | ||||||||| || |||| || ||| | | ||||||||| |||||||| | Sbjct 8790 GACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTA 8849 Query 11558 ATACATTGGTAAAAGTGTTAGCGCAGGGAGACAATCAAACAATCACTACTCACTATAAAA 11617 |||| || || || || || |||||||| || || |||||||||||||| Sbjct 8850 ATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACTATAAAA 8909 Query 11618 CTGAAACTTTTCATAATGATGCAGAATTACAAG---AGCATATAA-GACATATTGTAAAT 11673 ||| || | || |||| | ||| |||| || || ||| | Sbjct 8910 TCCCAACCGTTAGAACACCTGAAGAA-AAAAAGCCCCTCATACAAGGAGCGATT---CAG 8965 Query 11674 AATAATAATGCAATTATGGAAAGCA-TAGTTATCGGAACAAGGAGACTAGGACTAAAAAT 11732 || | ||||| || || ||| ||| |||| ||||||| || ||||| ||| || Sbjct 8966 AACACAAATGCCATCAT-GAATGCAGTAGTCGATGGAACAAAGAAGTTAGGATTAATCAT 9024 Query 11733 CAATGAGGATGAGACTATGCAATCACCAGACTATATAAATTATGGGAAGGTTCCAATTGT 11792 |||| | ||| || || |||||| |||| ||||| |||||||| || || || || | Sbjct 9025 CAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGCAAAGTACCGATCTT 9084 Query 11793 GAATGG---TGTCATTCGAGGGTTAAACACTAAAAGATGGTCAAGAGTAAACTTTGTGAC 11849 | || | || | | ||| | |||||| | ||||||| | | || |||||| Sbjct 9085 CCAAGGAAATATCTTGC---CGTTGATTACTAAACGTGTGTCAAGAATGACCTGTGTGAC 9141 Query 11850 AAATGACCAAATCCCT--AATCAAACCTCAACACTGTCATCAGTATCAACAAACTCATTG 11907 ||||| || |||| | | | || | ||| ||| ||||||| ||||| ||||| Sbjct 9142 CAATGATCAGATCCATTCATTTGAAAAT--GTACTCTCAGCAGTATCTACAAATGCATTG 9199 Query 11908 AC 11909 || Sbjct 9200 AC 9201 Score = 105 bits (116), Expect = 7e-19 Identities = 189/275 (69%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 11017 GTAATTGGGTTAAAAGCAAAGGAAAGGGAATTGAAGGATGCAGGTAGATTCTTTTCATTG 11076 ||||| || ||| ||||||||||| |||| | || | || |||| || || | Sbjct 21106 GTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTT 21165 Query 11077 ATGAGTTGGGAGTTAAGAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGAACATTTT 11136 ||| |||||| || | |||| ||||| |||| || ||| | || |||||| | | | Sbjct 21166 ATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTAT 21225 Query 11137 GTGCCATTATTCAAAGGATTAACTATGGCAGATGATCTACAAACTGTAATTAAAAAGATG 11196 || || | || ||||| |||||||||||||| || | || || || || || ||| Sbjct 21226 GTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATG 21285 Query 11197 ATTGATGTATCAGCAGGACAAGG---TACTGAAACCTATGAAAACATAACAATAGCGAAT 11253 || || || || |||||| ||||| ||| | || ||||| || ||| Sbjct 21286 ATAGACAGTTCTCTAGAACAAGGACTCACTGA---CTACTCCCAGATCACAATCGCAAAT 21342 Query 11254 AATATTGACTATGAGAAGTGGAATAATTATCAAAG 11288 | |||||||||||||| |||||||| ||||||| Sbjct 21343 CACATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 96.9 bits (106), Expect = 4e-16 Identities = 148/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 11082 TTGGGAGTTAAGAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGAACATTTTGTGCC 11141 |||||| || | ||||| ||||| |||| || ||| | || |||||| | | ||| || Sbjct 37954 TTGGGAACTACGTGAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACC 38013 Query 11142 ATTATTCAAAGGATTAACTATGGCAGATGATCTACAAACTGTAATTAAAAAGATGATTGA 11201 | || ||||| ||||||||||| || || | ||||| || || || |||||||| Sbjct 38014 GCTGTTTAAAGGGTTAACTATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGA 38073 Query 11202 TGTATCAGCAGGACAAGG---TACTGAAACCTATGAAAACATAACAATAGCGAATAATAT 11258 ||| |||||| | || || |||| | | || ||||| || || |||| Sbjct 38074 CAGATCTCTGGGACAATGCCTCACGGA---CTATTCACAAATCACAATCGCAAACCATAT 38130 Query 11259 TGACTATGAGAAGTGGAATAATTATCAAAG 11288 ||||||||||||||||| || ||||||| Sbjct 38131 CGACTATGAGAAGTGGAACAACCATCAAAG 38160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50621099298230