Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_020803.1 Length=11487 Score E Sequences producing significant alignments: (Bits) Value seq1383 253 1e-63 seq283 159 3e-35 >seq1383 Length=104272 Score = 253 bits (280), Expect = 1e-63 Identities = 423/607 (70%), Gaps = 16/607 (3%) Strand=Plus/Plus Query 6637 CTGATCATAGGCTTAAAAGGGAAAGAACGTGAATTAAAAAAGGCAGGACGGTTCTTCTCT 6696 ||| | || || |||| || || ||| | ||| |||||| | ||| | ||||||||| Sbjct 8306 CTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCT 8365 Query 6697 CTGATGTCATGGGAATTGAGAGAATATTTTGTAATAACAGAATACTTAATCAAGACACAC 6756 ||||||| |||||| | |||||||| ||||| || ||||| ||| | ||||| | | Sbjct 8366 TTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATAT 8425 Query 6757 TATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATGATATGACGGAAGTTGTAAAGAAA 6816 ||||| || | |||||||| ||||| ||||| || | ||||| || | ||||| Sbjct 8426 TATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAG 8485 Query 6817 ATGCTAGAAAGGAGTCAAGGGCAGGGAGAAGATGACTACGAGCACATCAGCATTGCCAAC 6876 ||| |||| || | || |||||| | ||||||| || ||| ||||||||| Sbjct 8486 ATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAAC 8545 Query 6877 CACATTGACTATGAGAAGTGGAATAATCATCAGAGAAAGGAATCAAATGGGCCTGTGTTC 6936 ||||| || ||||| || ||||| ||||| || ||| | || |||| | ||||| ||| Sbjct 8546 CACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTC 8605 Query 6937 AGAGTCATGGGACAATTCCTAGGATATCCCAG-----TTTGATCGAAAAAACTCATGACT 6991 | || ||||| |||| | |||| | |||| ||| ||| || ||| | | Sbjct 8606 ACTGTGATGGGGAAATTTTTTGGAT-TACCAGCACTTTTTTCTCG----TACACATCAGT 8660 Query 6992 TTTTTCAAGACAGCTTGATTTATTACAATGGGAGACCAGACCTGATG-GAAGTGAGGGGG 7050 ||||| | || || || |||||||||||| ||||| ||| | ||| ||||| || | Sbjct 8661 TTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAG 8720 Query 7051 AATGA--ATTATTGAACAAAACAGACAAGCTTGTCTGTTGGGATGGTCAGGCTGGAGGAC 7108 || | || | ||| || | | | ||||||||| |||| ||| ||||| | Sbjct 8721 AAACATTATACTCGAAGGAAGGATATTGG---GTCTGTTGGAATGGACAGCTAGGAGGGC 8777 Query 7109 TGGAAGGACTGAGACAAAAGGGATGGAGCATATTGAATCTACTTGTGATTCAGAGAGAGT 7168 | |||||||| ||||| | || ||||| ||||| || || || || | ||||||| | Sbjct 8778 TCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAAT 8837 Query 7169 CCAAAATCAGAAACACCAAAGTGCAAACATTGGCTCAGGGAGACAATCAAGTTGTTTGCA 7228 ||||| | || ||| |||| | ||||||||||| |||||||| || ||| | || | Sbjct 8838 GTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTA 8897 Query 7229 CCCAATA 7235 | || || Sbjct 8898 CTCACTA 8904 Score = 150 bits (166), Expect = 1e-32 Identities = 212/298 (71%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 6614 AAGATGGACTACCCAAAGAGTCTCTGATCATAGGCTTAAAAGGGAAAGAACGTGAATTAA 6673 || |||||||| || | || || | || || ||| || || ||| ||| | | Sbjct 21080 AAAATGGACTAACCCAGGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCA 21139 Query 6674 AAAAGGCAGGACGGTTCTTCTCTCTGATGTCATGGGAATTGAGAGAATATTTTGTAATAA 6733 ||| | ||||| || ||||| || ||||| |||||| | | | || ||||| || | Sbjct 21140 AAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCA 21199 Query 6734 CAGAATACTTAATCAAGACACACTATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATG 6793 | ||||| ||||||| | ||||||| || | || ||||||||||| |||||||| Sbjct 21200 CGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACA 21259 Query 6794 ATATGACGGAAGTTGTAAAGAAAATGCTAGAAAGGAGTCAAGGGCAGGGAGAAGATGACT 6853 ||||||| |||| ||||||||||| |||| || || || || ||| ||||| Sbjct 21260 ATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCTAGAACAAGGACTCACTGACT 21319 Query 6854 ACGAGCACATCAGCATTGCCAACCACATTGACTATGAGAAGTGGAATAATCATCAGAG 6911 || || |||| || || || ||||||||||||||||| |||||||| ||||| || Sbjct 21320 ACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 104 bits (114), Expect = 2e-18 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 6682 GGACGGTTCTTCTCTCTGATGTCATGGGAATTGAGAGAATATTTTGTAATAACAGAATAC 6741 ||||| || ||||| || | ||| |||||| | | || || ||||| || || ||||| Sbjct 37931 GGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTACTTTGTGATCACGGAATAT 37990 Query 6742 TTAATCAAGACACACTATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATGATATGACG 6801 ||||||| | ||||||| || | || ||||||||||| ||||| || ||||||| Sbjct 37991 CTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCCGACAATATGACC 38050 Query 6802 GAAGTTGTAAAGAAAATGCTAGAAAGGAGTCAAGGGCAGGGAGAAGATGACTACGAGCAC 6861 || | ||||||||| | || || || || || | ||||| || Sbjct 38051 ACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGCCTCACGGACTATTCACAA 38110 Query 6862 ATCAGCATTGCCAACCACATTGACTATGAGAAGTGGAATAATCATCAGAG 6911 |||| || || ||||| || ||||||||||||||||| || ||||| || Sbjct 38111 ATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAACCATCAAAG 38160 >seq283 Length=322283 Score = 159 bits (176), Expect = 3e-35 Identities = 263/375 (70%), Gaps = 6/375 (2%) Strand=Plus/Plus Query 6637 CTGATCATAGGCTTAAAAGGGAAAGAACGTGAATTAAAAAAGGCAGGACGGTT-CTTCTC 6695 || || ||| | || |||||||||||| | ||| | | |||| ||| ||| || |||||| Sbjct 271945 CTAATAATATGATTGAAAGGGAAAGAAAGAGAAATCAGAAAGACAG-ACGATTTCTTCTC 272003 Query 6696 TCTGATGTCATGGGAATTGAGAGAATATTTTGTAATAACAGAATACTTAATCAAGACACA 6755 | || || ||| ||||| |||||||| ||||| || || || | || |||| | Sbjct 272004 TTTG---TCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGA 272060 Query 6756 CTATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATGATATGACGGAAGTTGTAAAGAA 6815 ||||| || | ||| | | || ||||| |||||| ||||| |||||||||||| Sbjct 272061 GTATGTTCCTCTCTTCCATGTTTTG-CCATGAAAGATGACATGACATCAGTTGTAAAGAA 272119 Query 6816 AATGCTAGAAAGGAGTCAAGGGCAGGGAGAAGATGACTACGAGCACATCAGCATTGCCAA 6875 |||| | || || | ||| || ||| |||| ||||| |||| | | ||||| || Sbjct 272120 AATGATGGACAGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAA 272179 Query 6876 CCACATTGACTATGAGAAGTGGAATAATCATCAGAGAAAGGAATCAAATGGGCCTGTGTT 6935 |||||| || || || || |||||||| ||||| |||| || | ||| || ||||| Sbjct 272180 CCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTT 272239 Query 6936 CAGAGTCATGGGACAATTCCTAGGATATCCCAGTTTGATCGAAAAAACTCATGACTTTTT 6995 || || ||||| ||||| | |||| | | | || || | | || ||||| || || Sbjct 272240 CAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTT 272299 Query 6996 TCAAGACAGCTTGAT 7010 ||| | ||||| || Sbjct 272300 CCAACAAAGCTTTAT 272314 Score = 120 bits (132), Expect = 2e-23 Identities = 197/283 (70%), Gaps = 1/283 (0%) Strand=Plus/Plus Query 6757 TATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATGATATGACGGAAGTTGTAAAGAAA 6816 ||||| || | ||| | || || |||||||||||||| ||||| ||||||||||||| Sbjct 273421 TATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAA 273480 Query 6817 ATGCTAGAAAGGAGTCAAGGGCAGGGAGAAGATGACTACGAGCACATCAGCATTGCCAAC 6876 ||| | | || | ||| || ||| || | |||||||||| | | ||||| ||| Sbjct 273481 ATGATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAAC 273540 Query 6877 CACATTGACTATGAGAAGTGGA-ATAATCATCAGAGAAAGGAATCAAATGGGCCTGTGTT 6935 ||||| || || || || | || | |||| ||||| | ||||| |||| || ||||| Sbjct 273541 CACATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTT 273600 Query 6936 CAGAGTCATGGGACAATTCCTAGGATATCCCAGTTTGATCGAAAAAACTCATGACTTTTT 6995 || ||| ||||| |||| | | ||| | || || | || |||| || || Sbjct 273601 CAAAGTAATGGGTCAATCCTTTAGATTGGTTAACCTGTTCTGCCAGACCAATGAATTCTT 273660 Query 6996 TCAAGACAGCTTGATTTATTACAATGGGAGACCAGACCTGATG 7038 ||| | ||||| || || ||||| | ||| ||||||| ||| Sbjct 273661 CCAACAAAGCTTTATATACTACAAAGAGAGGACAGACCTAATG 273703 Score = 107 bits (118), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 6757 TATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATGATATGACGGAAGTTGTAAAGAAA 6816 ||||| || | ||| | || || |||||||||||||| |||| ||||||||| ||| Sbjct 292274 TATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAA-AAA 292332 Query 6817 ATGCTAGAAAGGAGTCAAGGGCAGGGAGAAGATGACTACGAGCACATCAGCATTGCCAAC 6876 ||| | | || | ||| || ||| || | |||||||||| | | ||||| ||| Sbjct 292333 ATGATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAAC 292392 Query 6877 CACATTGACTATGAGAAGTGGAATAATCATCAGAGAAAGGAATCAAATGGGCCTGTGTTC 6936 ||||| || || || || ||||| |||| ||||| | |||| |||| || |||||| Sbjct 292393 CACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTC 292452 Query 6937 AGAGTCATGGGACAAT 6952 | ||| ||||| |||| Sbjct 292453 AAAGTAATGGGTCAAT 292468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36618636093468