Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_020805.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq1383 271 5e-69 seq283 123 2e-24 >seq1383 Length=104272 Score = 271 bits (300), Expect = 5e-69 Identities = 619/917 (68%), Gaps = 26/917 (3%) Strand=Plus/Plus Query 6300 TGGTGATCGGATTAAAAGGAAAAGAAAGAGAACTGAAGATTGCAGGTAGATTTTTCTCAT 6359 |||| |||||||||| || || ||||||||| | || || | || ||||| ||||| | Sbjct 8307 TGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTT 8366 Query 6360 TGATGTCTTGGAAGCTTAGGGAATACTTTGTTGTCACAGAGTATTTGATC-AAGACTCAC 6418 ||||||| ||| | || || ||||||||||| |||||||||| ||||| |||| | | Sbjct 8367 TGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAAT-AT 8425 Query 6419 TTTGTGCCATTGTTCCATGGGCTGACCATGGCTGATGATATGACAGCAGTGATCAAAAAG 6478 | ||| ||| | ||| | || | || ||||| || | ||||| | |||||||| ||| Sbjct 8426 TATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAG 8485 Query 6479 ATGCTGGAAAGCTCGTCTGGTCAAGGGCTAACAAACTACGACAGCGTTTGTATTGCAAAT 6538 ||| | || ||||| || || || |||| ||||| | | ||||| || Sbjct 8486 ATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAAC 8545 Query 6539 CATATTGACTATGAAAAATGGAATAATCATCAACGAAAATTGTCCAATGGACCTGTGTTT 6598 || || || |||||||||||||| ||||| ||| || | || | | ||||| || Sbjct 8546 CACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTC 8605 Query 6599 AAAGTCATGGGACAATTCTTGGGTTATCCA--AATTTGATATACCGGACACATGAGTTTT 6656 | || ||||| |||| || || | ||| | ||| | | || |||||| |||||| Sbjct 8606 ACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTT--TTTCTCGTACACATCAGTTTT 8663 Query 6657 TTGAGAAAAGTTTAATTTACTATAATGAAAGACCGGATCTCATGAAAGTCAGAAATGG-G 6715 || || |||||||| |||| || ||||||||||| || | |||| |||| |||| | Sbjct 8664 TTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGA---TCAGTGATGGAG 8720 Query 6716 ATCTTAGAAAATAGCACACATCAGA--GGGTTTGCTGGAATGGACAGGCAGGTGGTTTAG 6773 | | | | | | | | | |||| || |||||||||||| ||| || | | Sbjct 8721 AAACATTATACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCG 8780 Query 6774 AAGGTTTGAGACAGAAAGGATGGAGTATTCTTAATTTGCTGGTCATACAGAGAGAAGCGA 6833 |||| | |||||| | || |||||||| | || | || || || |||||||| | Sbjct 8781 AAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTA 8840 Query 6834 AAATCCGGAATACCGCAGTTAAAGTGCTAGCACAAGGCGACAATCAAGTCATATGTACAC 6893 |||| || |||||| ||| || | || ||||| ||||| || || |||||||| | Sbjct 8841 AAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTC 8900 Query 6894 AGTACAAGA-CCAAACAGTATCGAAACGATATCGAGTTGAGACAAG--CCTTAAACCAAA 6950 | || || | || ||| || | ||| | | || | | ||| ||| | || | Sbjct 8901 ACTATAAAATCCCAACCGT-TAGAA--CACCTGAAG--AAAAAAAGCCCCTCATACAAGG 8955 Query 6951 TG----GCAGCAAACAATGATGTCATCATGAAGGCCATAGAGTCAGGAACCAATAAGTTG 7006 | ||| | |||| ||| ||||||||| || ||| ||||| || ||||| Sbjct 8956 AGCGATTCAGAACACAA--ATGCCATCATGAATGCAGTAGTCGATGGAACAAAGAAGTTA 9013 Query 7007 GGTTTGTTGATCAATCAGGATGAGACGATGCAATCTGCTGATTATCTGAACTATGGGAAG 7066 || || | |||||| | ||| || || ||||| || |||||| |||| ||||| || Sbjct 9014 GGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGCAAA 9073 Query 7067 GTACCTATCTTTAGAGGAGTAATCAGAGGGCTGGAAACAAAGCGATGGTCCCGAGTCACT 7126 ||||| ||||| |||| ||| | || || || || ||| || | || Sbjct 9074 GTACCGATCTTCCAAGGAAATATCTTGCCGTTGATTACTAAACGTGTGTCAAGAATGACC 9133 Query 7127 TGTGTGACAAATGACCAATTACCAACGTGTGCAAATCTCATGTCATCTGTATCTACAAAT 7186 |||||||| ||||| || | | | | || |||| | | ||| | |||||||||||| Sbjct 9134 TGTGTGACCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATCTACAAAT 9193 Query 7187 GCTTTGACAGTGGCACA 7203 || ||||| | ||||| Sbjct 9194 GCATTGACGATCGCACA 9210 Score = 134 bits (148), Expect = 1e-27 Identities = 214/302 (71%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 6272 GACAAAAATGGATTATCTGATGAGGATTTGGTGATCGGATTAAAAGGAAAAGAAAGAGAA 6331 |||||||||||| || | | || || | || |||||| ||| || ||| |||| ||| Sbjct 21076 GACAAAAATGGACTAACCCAGGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAA 21135 Query 6332 CTGAAGATTGCAGGTAGATTTTTCTCATTGATGTCTTGGAAGCTTAGGGAATACTTTGTT 6391 | || || | || |||||||||| | ||||||||| | || | | |||||||| Sbjct 21136 GTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTG 21195 Query 6392 GTCACAGAGTATTTGATC-AAGACTCACTTTGTGCCATTGTTCCATGGGCTGACCATGGC 6450 |||| || ||| | ||| |||| | ||| ||| || |||| | ||| | || ||||| Sbjct 21196 ATCACGGAATATCTAATCAAAGAAT-ACTATGTACCGCTGTTTAAAGGGTTAACTATGGC 21254 Query 6451 TGATGATATGACAGCAGTGATCAAAAAGATGCTGGAAAGCTCGTCT-GGTCAAGGGCTAA 6509 || ||||||| |||| || || || ||| | || || || ||| | ||||| || | Sbjct 21255 AGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTC-TCTAGAACAAGGACTCA 21313 Query 6510 CAAACTACGACAGCGTTTGTATTGCAAATCATATTGACTATGAAAAATGGAATAATCATC 6569 | ||||| | | || |||||||| ||||||||||| ||||||||||| |||| Sbjct 21314 CTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAAATGGAATAACCATC 21373 Query 6570 AA 6571 || Sbjct 21374 AA 21375 Score = 120 bits (132), Expect = 2e-23 Identities = 240/350 (69%), Gaps = 13/350 (4%) Strand=Plus/Plus Query 6860 CTAGCACAAGGCGACAATCAAGTCATATGTACACAGTACAAGA--CCAAACAGTATCGAA 6917 ||||| ||||| |||||||||||||| || ||||| ||||||| || ||| ||| || Sbjct 29084 CTAGCTCAAGGAGACAATCAAGTCATCTGCACACACTACAAGATTCCCAAC-GTAC--AA 29140 Query 6918 ACGATATC-GAGTTGAGACAAGCCTTAAACCAAATGGCAGCAAACAATGATGTCA---TC 6973 || || || ||| | |||||| | | || || || ||| || || Sbjct 29141 AC----TCAGAAGAAAGAAAGCCCTTAATTGATGGTGTAGTCAAGAACAATGGCACAATC 29196 Query 6974 ATGAAGGCCATAGAGTCAGGAACCAATAAGTTGGGTTTGTTGATCAATCAGGATGAGACG 7033 ||||| || ||| |||||| || || | ||| | | |||||| || ||||||| Sbjct 29197 ATGAATGCGGTAGTAGAAGGAACAAAGAAACTTGGTCTAATAATCAATGAGAGTGAGACG 29256 Query 7034 ATGCAATCTGCTGATTATCTGAACTATGGGAAGGTACCTATCTTTAGAGGAGTAATCAGA 7093 || ||||| || ||||| ||||||||||||| || || | ||||||||| ||| Sbjct 29257 ATCCAATCAGCAGATTACATGAACTATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTC 29316 Query 7094 GGGCTGGAAACAAAGCGATGGTCCCGAGTCACTTGTGTGACAAATGACCAATTACCAACG 7153 | | || ||| || ||| || | || ||||| |||||||| ||| | ||| | Sbjct 29317 CCATTAGTCACCAAGAGAGTGTCTAGAATGACCTGTGTAACAAATGATCAAATCCCATCC 29376 Query 7154 TGTGCAAATCTCATGTCATCTGTATCTACAAATGCTTTGACAGTGGCACA 7203 | ||||||| || | || | || || || || ||||||||| ||||||| Sbjct 29377 TTTGCAAATGTCCTCTCTGCAGTGTCAACCAACGCTTTGACATTGGCACA 29426 >seq283 Length=322283 Score = 123 bits (136), Expect = 2e-24 Identities = 240/350 (69%), Gaps = 6/350 (2%) Strand=Plus/Plus Query 6309 GATTAAAAGGAAAAGAAAGAGAACTGAAGATTGCAGGTAGATTT-TTCTCATTGATGTCT 6367 |||| ||||| |||||||||||| | ||| | | ||||| ||||| | ||||| Sbjct 271955 GATTGAAAGGGAAAGAAAGAGAAAT-CAGAAAGACAGACGATTTCTTCTCTT---TGTCT 272010 Query 6368 TGGAAGCTTAGGGAATACTTTGTTGTCACAGAGTATTTGATCAAGACTCACTTTGTGCCA 6427 |||| | |||||||| || || | || |||||| | || |||| | | ||| || Sbjct 272011 TGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCCT 272070 Query 6428 TTGTTCCATGGGCTGACCATGGCTGATGATATGACAGCAGTGATCAAAAAGATGCTGGAA 6487 | ||||||| || ||||| ||||| |||||| |||| | || || ||| |||| Sbjct 272071 CTCTTCCATGTTTTG-CCATGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGAC 272129 Query 6488 AGCTCGTCTGGTCAAGGGCTAACAAACTACGACAGCGTTTGTATTGCAAATCATATTGAC 6547 || | || ||||| ||| |||||| | ||| | ||||| || || || || Sbjct 272130 AGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGAT 272189 Query 6548 TATGAAAAATGGAATAATCATCAACGAAAATTGTCCAATGGACCTGTGTTTAAAGTCATG 6607 || ||||| |||||||| |||||| ||| | ||| ||| ||||| || || ||| Sbjct 272190 TACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAATG 272249 Query 6608 GGACAATTCTTGGGTTATCCAAATTTGATATACCGGACACATGAGTTTTT 6657 || ||||||| || | | ||| || | |||| ||| ||||| || || Sbjct 272250 GGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTT 272299 Score = 102 bits (112), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 6431 TTCCATGGGCTGACCATGGCTGATGATATGACAGCAGTGATCAAAAAGATGCTGGAAAGC 6490 |||||||| |||||||||| ||||| |||| | |||| | ||||| ||| ||| || Sbjct 292286 TTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAAAAA-ATGATGGGCAGT 292344 Query 6491 TCGTCTGGTCAAGGGCTAACAAACTACGACAGCGTTTGTATTGCAAATCATATTGACTAT 6550 | | || ||||| ||| |||||||| ||| | ||||| || || || || || Sbjct 292345 ACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAACCACATCGATTAC 292404 Query 6551 GAAAAATGGAATAATCATCAACGAAAATTGTCCAATGGACCTGTGTTTAAAGTCATGGGA 6610 ||||||||||| |||| || | | | || |||| ||| ||||| ||||| ||||| Sbjct 292405 GAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTCAAAGTAATGGGT 292464 Query 6611 CAATTCTT 6618 |||| ||| Sbjct 292465 CAATCCTT 292472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35445023356912