Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_020806.1 Length=11088 Score E Sequences producing significant alignments: (Bits) Value seq1383 192 4e-45 seq283 140 2e-29 >seq1383 Length=104272 Score = 192 bits (212), Expect = 4e-45 Identities = 414/612 (68%), Gaps = 8/612 (1%) Strand=Plus/Plus Query 6253 GATGACCTGGTGATTGGGCTAAAAGGGAAGGAAAGAGAATTGAAGATAGCCGGGAGATTT 6312 || || ||||| || || ||| || |||||||||||| | || || | || ||||| Sbjct 8300 GAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTC 8359 Query 6313 TTCTCACTAATGTCGTGGAAGCTGAGAGAATATTTTGTGATCACGGAATATCTAATTAAG 6372 ||||| | ||||||||| | || |||||||| ||||| ||||| || || || || || Sbjct 8360 TTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAA 8419 Query 6373 ACACACTTTGTACCACTTTTCCACGGCTTGACAATGGCAGATGACATGACGGCTGTAATA 6432 | | | ||||||||||||| | ||||| |||||||| || ||||||| | || || Sbjct 8420 GAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATC 8479 Query 6433 AAGAAAATGTTGGAAAGTTCAAGTGGACAGGGTCTAAAAGATTATTCGGCAGTATGCATT 6492 ||||| ||| | || || || |||||||| ||| || || || | | ||| Sbjct 8480 AAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATT 8539 Query 6493 GCAAACCACATTGACTATGAGAAATGGAACAACCATCAGAGGAAACGGTCAAATGAACCA 6552 || |||||||| || ||||| ||||||||||| || || || | |||| | || Sbjct 8540 GCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCT 8599 Query 6553 ATTTTTAAAGTCATGGGTCAATTCTTGGGGTTTCCCAACCTTATATCGAGGACTCATGAA 6612 | || | || ||||| |||| || || || || ||| | || | || ||| | Sbjct 8600 GTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAG 8659 Query 6613 TTCTTTGAGAAAAGTCTCATCTATTATAATGGAAGGCCTGATTTGATGAAGGTGCAAGAT 6672 || ||| || ||||| | | ||||| |||| ||| || || || |||| | ||| Sbjct 8660 TTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGA---TCAGTGAT 8716 Query 6673 GGA-AGACTTGTGAACAC-AACGAAGCA-ATT-GGTTTGTTGGGAAGGACAGGCAGGCGG 6728 ||| | || | | || | || |||| | ||| ||| |||||| | |||||| ||| || Sbjct 8717 GGAGAAACAT-TATACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGG 8775 Query 6729 ATTAGAGGGGTTAAGACAGAAGGGATGGAGCATCTTAAACTTATTGGTTATTCAAAGGGA 6788 | || || | |||||| | || ||||| || |||||| | | || | | || || Sbjct 8776 GCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGA 8835 Query 6789 ATCCAAGATTCGGAACACAGCAGTTAAAGTCCTTGCACAAGGTGATAATCAAGTAATATG 6848 || || || || || || ||| || | || ||||| || || || || ||||| Sbjct 8836 ATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATG 8895 Query 6849 CACACAGTACAA 6860 || || || || Sbjct 8896 TACTCACTATAA 8907 Score = 170 bits (188), Expect = 1e-38 Identities = 232/321 (72%), Gaps = 2/321 (1%) Strand=Plus/Plus Query 6214 GAGTTTTTGGAAGAAATTGACAAAAATGGGTTGAGTGATGATGACCTGGTGATTGGGCTA 6273 ||||| || | || | | ||||||||||| | | | || || || || || || ||| Sbjct 21058 GAGTTCTTAGCAGGAGTAGACAAAAATGGACTAACCCAGGAAGAACTTGTAATCGGACTA 21117 Query 6274 AAAGGGAAGGAAAGAGAATTGAAGATAGCCGGGAGATTTTTCTCACTAATGTCGTGGAAG 6333 | || ||||||| ||| | || ||| | || |||||||||| || ||||| ||| | Sbjct 21118 AGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAA 21177 Query 6334 CTGAGAGAATATTTTGTGATCACGGAATATCTAATTAAGACACACTTTGTACCACTTTTC 6393 || | | || ||||||||||||||||||||||| || | ||| |||||| || || Sbjct 21178 CTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTT 21237 Query 6394 CACGGCTTGACAATGGCAGATGACATGACGGCTGTAATAAAGAAAATGTTGGAAAGTTCA 6453 | || || || |||||||| | ||||| | || |||||||||||| | || ||||| Sbjct 21238 AAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCT 21297 Query 6454 AGTGGACAGGGTCTAAAAGATTATTCGGCAG-TATGCATTGCAAACCACATTGACTATGA 6512 | ||| || || | || || || ||| | || ||||| |||||||||||||| Sbjct 21298 CTAGAACAAGGACTCACTGACTACTC-CCAGATCACAATCGCAAATCACATTGACTATGA 21356 Query 6513 GAAATGGAACAACCATCAGAG 6533 ||||||||| |||||||| || Sbjct 21357 GAAATGGAATAACCATCAAAG 21377 Score = 141 bits (156), Expect = 7e-30 Identities = 180/248 (73%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 6286 AGAGAATTGAAGATAGCCGGGAGATTTTTCTCACTAATGTCGTGGAAGCTGAGAGAATAT 6345 |||||| | || ||| | || |||||||||| || | ||| ||| | || | || || Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6346 TTTGTGATCACGGAATATCTAATTAAGACACACTTTGTACCACTTTTCCACGGCTTGACA 6405 ||||||||||||||||||||||| || | ||| |||||| || || | || || || Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 6406 ATGGCAGATGACATGACGGCTGTAATAAAGAAAATGTTGGAAAGTTCAAGTGGACAGGGT 6465 ||||| || | ||||| |||| || ||||||||| | || || || ||||| | Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 6466 CTAAAAGATTATTCGGCAGTATGCATTGCAAACCACATTGACTATGAGAAATGGAACAAC 6525 || | || ||||| | | || |||||||| || ||||||||||| ||||||||| Sbjct 38093 CTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAAC 38152 Query 6526 CATCAGAG 6533 ||||| || Sbjct 38153 CATCAAAG 38160 Score = 98.7 bits (108), Expect = 7e-17 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 6952 GGAACAAACAAACTAGGTTTGTTGATCAACCAAGATGAAACAATGCAATCAGCTGACTAC 7011 |||||||| ||||| ||| | | ||||| | ||| || || |||||||| || ||| Sbjct 29215 GGAACAAAGAAACTTGGTCTAATAATCAATGAGAGTGAGACGATCCAATCAGCAGATTAC 29274 Query 7012 CTGAATTACGGTAAAGTTCCCATATTTAGAGGAGTGATACGAGGTTTAGAAACAAAAAGG 7071 |||| || || ||||||||| ||||||||||| || | |||| || || || Sbjct 29275 ATGAACTATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTCCCATTAGTCACCAAGAGA 29334 Query 7072 TGGTCACGAGTGACTTGTGTAACAAATGACCAACTTCCCACCTGTGCAAACTTGATGTCA 7131 ||| || |||| |||||||||||||| ||| | || ||| |||||| | | || Sbjct 29335 GTGTCTAGAATGACCTGTGTAACAAATGATCAAATCCCATCCTTTGCAAATGTCCTCTCT 29394 Query 7132 TCAGTGTCTACTAATGC 7148 ||||||| || || || Sbjct 29395 GCAGTGTCAACCAACGC 29411 Score = 93.3 bits (102), Expect = 3e-15 Identities = 133/186 (72%), Gaps = 5/186 (3%) Strand=Plus/Plus Query 6973 TTGATCAACCAAGATGAAACAATGCAATCAGCTGACTACCTGAATTACGGTAAAGTTCCC 7032 || |||||| || ||| || || ||||| || ||||| |||| || || ||||| ||| Sbjct 17750 TTTATCAACGAAAGTGAGACTATACAATCTGCGGACTATATGAACTATGGGAAAGTGCCC 17809 Query 7033 ATATTTAGAGGAGTGATACGAGGTTTAGAAACAAAAAGGTGGTCACGAGTGACTTGTGTA 7092 ||||||||||| ||| | ||| || || || | | || ||||||||||| Sbjct 17810 ATATTTAGAGGGAATATATTACCCCTAGTTACCAAGAGATAG----GA-TGACTTGTGTA 17864 Query 7093 ACAAATGACCAACTTCCCACCTGTGCAAACTTGATGTCATCAGTGTCTACTAATGCCCTT 7152 ||||| |||||| | ||| | | || || | | ||| ||||||| ||||||||||| Sbjct 17865 ACAAACGACCAAATCCCCTCTTTCGCGAATGTCCTCTCAGCAGTGTCAACTAATGCCCTG 17924 Query 7153 ACTGTT 7158 ||| || Sbjct 17925 ACTATT 17930 >seq283 Length=322283 Score = 140 bits (154), Expect = 2e-29 Identities = 243/346 (70%), Gaps = 8/346 (2%) Strand=Plus/Plus Query 6274 AAAGGGAAGGAAAGAGAATTGAAGATAGCCGGGAGATTTTTCTCACTAATGTCGTGGAAG 6333 |||||||| ||||||||| | | || || | | ||||| | || || |||| |||| Sbjct 271960 AAAGGGAAAGAAAGAGAAATCA-GAAAGACAGACGATTTCT-TCTCTT-TGTCTTGGACC 272016 Query 6334 CTGAGAGAATATTTTGTGATCACGGAATATCTAATTAAGACACACTTTGTACCACTTTTC 6393 |||| |||||||| || || || || ||||| ||||||| | | ||| || || ||| Sbjct 272017 TTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCCTCTCTTC 272076 Query 6394 CACGGCTTGACAATGGCAGATGACATGACGGCTGTAATAAAGAAAATGTTGGAAAGTTCA 6453 || | ||| || || |||||||||||| | || ||||||||||| |||| ||| | Sbjct 272077 CATGTTTTGCCA-TGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGACAGTACC 272135 Query 6454 AGTGGACAGGGTCTAAAAGATTATTCGGCAGTATGCATTGCAAACCACATTGACTATGAG 6513 | ||||| || ||| | | || | || | ||||| |||||||| || || || Sbjct 272136 ATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGATTACGAA 272195 Query 6514 AAATGGAACAACCATCAGAGGA--AACGGTCAAATGAACCAATTTTTAAAGTCATGGGTC 6571 || ||||| || ||||| || | || | | ||| ||||| | || || || |||||| Sbjct 272196 AATTGGAATAAACATCAAAGAATTAAAGCT--AATAAACCAGTGTTCAATGTAATGGGTA 272253 Query 6572 AATTCTTGGGGTTTCCCAACCTTATATCGAGGACTCATGAATTCTT 6617 ||||||| || || | || || | | ||| ||||||||||| Sbjct 272254 AATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTT 272299 Score = 109 bits (120), Expect = 4e-20 Identities = 147/200 (74%), Gaps = 5/200 (3%) Strand=Plus/Plus Query 6381 TGTACCACTTTTCCACGGCTTGACAATGGCAGATGACATGACGGCTGTAATAAAGAAAAT 6440 ||| || || ||||| || ||||| |||||||||||||||| | || |||| ||||| Sbjct 292276 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAA-AAAAT 292334 Query 6441 GTTGGAAAGTTCAAGTGGACAGGGTCTAAAAGATTATTCG-GCA-GTATGCATTGCAAAC 6498 | ||| ||| | | ||||| || ||| | || || ||| || | ||||| ||| Sbjct 292335 GATGGGCAGTACCACAGGACAAGGACTAGGTAACTA--CGAGCATGTTGGAATTGCTAAC 292392 Query 6499 CACATTGACTATGAGAAATGGAACAACCATCAGAGGAAACGGTCAAATGAACCAATTTTT 6558 ||||| || || || ||||||||||| | ||||||| || ||||||||| | || Sbjct 292393 CACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTC 292452 Query 6559 AAAGTCATGGGTCAATTCTT 6578 ||||| |||||||||| ||| Sbjct 292453 AAAGTAATGGGTCAATCCTT 292472 Score = 105 bits (116), Expect = 5e-19 Identities = 147/201 (73%), Gaps = 5/201 (2%) Strand=Plus/Plus Query 6381 TGTACCACTTTTCCACGGCTTGACAATGGCAGATGACATGACGGCTGTAATAAAGAAAAT 6440 ||| || || ||||| || ||||| ||||||||||||||||| | || |||||||||| Sbjct 273423 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAAAT 273482 Query 6441 GTTGGAAAGTTCAAGTGGACAGGGTCTAAAAGATTATTCG-GCA-GTATGCATTGCAAAC 6498 | ||| ||| | | ||||| || ||| | || || ||| || | ||||| ||| Sbjct 273483 GATGGGCAGTACCATAGGACAAGGACTAGGTAACTA--CGAGCAGGTTGGAATTGCTAAC 273540 Query 6499 CACATTGACTATGAGAAATGGA-ACAACCATCAGAGGAAACGGTCAAATGAACCAATTTT 6557 ||||| || || || |||| || | || | ||||||| || ||||||||| | || Sbjct 273541 CACATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTT 273600 Query 6558 TAAAGTCATGGGTCAATTCTT 6578 ||||| |||||||||| ||| Sbjct 273601 CAAAGTAATGGGTCAATCCTT 273621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35342692001136