Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_022580.1 Length=12676 Score E Sequences producing significant alignments: (Bits) Value seq1383 224 8e-55 >seq1383 Length=104272 Score = 224 bits (248), Expect = 8e-55 Identities = 521/780 (67%), Gaps = 19/780 (2%) Strand=Plus/Plus Query 7711 TGGTTATTGGTTTACAAGCCAAAGAAAGGGAAATCAAGGATGAGGGTCGATTTTTCTCTT 7770 |||| || || ||| |||||| ||||| ||| | || ||| |||| ||||||| Sbjct 8307 TGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTT 8366 Query 7771 TAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCATT 7830 | ||||| |||||| | | ||||| ||||| | ||||| ||| | || ||||| ||| Sbjct 8367 TGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATT 8426 Query 7831 TTGTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAAAGA 7890 ||| ||| | ||| | || ||||| ||||| || | | ||||| ||||| || |||| Sbjct 8427 ATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGA 8486 Query 7891 TGCTGGACAATACAATCGGCCAAGGTGGCAAGGACTACACACAAATTTGCATAGCCAATC 7950 || | || | | | || || || | |||||| | ||||| || ||||| | Sbjct 8487 TGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACC 8546 Query 7951 ACTTTGATTATGAGAAATGGAACAATCATCAGAGGAAGGAATCTANNNNNNNNNNNNNNN 8010 || | |||||||| |||||||||||||| || || | || || | Sbjct 8547 ACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCA 8606 Query 8011 NNNNNATGGGGCAGTTTCTCGGATATCCCTCCTTAATTGAGAGAACTCATGAATTCTTTG 8070 |||||| | ||| | |||| || | | || | || ||| | || ||| Sbjct 8607 CTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTA 8666 Query 8071 AAAAAAGCTGGATTTATTATAAGGACAGAGCAGA-TTGTTTAGAAGTGAAGGGTGATAGA 8129 | |||| | ||||||| || || ||| | || || | | |||| | || || | | Sbjct 8667 AGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTG-ATGGAGAAACA 8725 Query 8130 ATTTACTCCACTGAAGGGCAAT---TCTGTTGGAATGGACAACTAGGAGGATTGGAAGGT 8186 | ||||| | ||||| | | |||||||||||||||| |||||||| | ||||| Sbjct 8726 TTATACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGA 8785 Query 8187 CTCCGACAAAAAGGTTGGAGTATTTTAAATTTGTTAGTCATAAATAGAGAGAGCAAGATA 8246 ||| |||| | || |||||||| ||||| | |||| || | ||||| | || ||| Sbjct 8786 CTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATA 8845 Query 8247 CGAAATACCATGGTGAAGTGTTTGGCCCAAGGAGATAATCAAGTGATATTTACATCA-TA 8305 || |||||| ||||| ||||| |||||||| || || || |||| ||| ||| || Sbjct 8846 CGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTAC-TCACTA 8904 Query 8306 TAAGAT-TGAACAATATAGAACCAATGAAGAAAGAAATTTTAACAT---AAGAGCCATAG 8361 ||| || ||| | |||||| |||||||| ||| ||| | |||| | Sbjct 8905 TAAAATCCCAACCGT-TAGAACACCTGAAGAAAAAAAGCCCCTCATACAAGGAGCGA--- 8960 Query 8362 TCCAGAATAACAATGAGATAATAGAT--AGTATTTCTAATGGGACAAAGAAGTTAGGATT 8419 | ||||| | |||| || || || |||| | |||| ||||||||||||||||| Sbjct 8961 TTCAGAACACAAATGCCATCATGAATGCAGTAGT--CGATGGAACAAAGAAGTTAGGATT 9018 Query 8420 GTTGATTAATCATGATGAAACCATACAGAGCGCGGATTACATGATTTATGGGAAAGTTCC 8479 | || ||| | |||||||||||| || ||||| |||| |||||| ||||| || Sbjct 9019 AATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGCAAAGTACC 9078 Score = 114 bits (126), Expect = 1e-21 Identities = 180/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 7727 AGCCAAAGAAAGGGAAATCAAGGATGAGGGTCGATTTTTCTCTTTAATGTCATGGGAATT 7786 ||| || |||| |||| |||| || ||||||||||| | ||||| |||||| | Sbjct 21120 AGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACT 21179 Query 7787 ACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCATTTTGTTCCATTGTTCCA 7846 ||| | || ||||| | || ||||| |||| ||||| | | ||| || |||| | Sbjct 21180 ACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAA 21239 Query 7847 TGGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAAAGATGCTGGACAATACAAT 7906 || ||||| |||||||| || | || || || || || || ||| | |||| | | | Sbjct 21240 AGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCT 21299 Query 7907 CGGCCAAGGTGGCAAGGACTACACACAAATTTGCATAGCCAATCACTTTGATTATGAGAA 7966 | ||||| || |||||| | || || || || |||||| |||| |||||||| Sbjct 21300 AGAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAA 21359 Query 7967 ATGGAACAATCATCAGAG 7984 |||||| || ||||| || Sbjct 21360 ATGGAATAACCATCAAAG 21377 Score = 109 bits (120), Expect = 4e-20 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 7755 GGTCGATTTTTCTCTTTAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATAC 7814 || ||||||||||| | | ||| |||||| |||| || || ||||| | || ||||| Sbjct 37931 GGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTACTTTGTGATCACGGAATAT 37990 Query 7815 TTAATTAAAGAGCATTTTGTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACC 7874 |||| ||||| | | ||| || |||| | || ||||| ||||| || || | ||| Sbjct 37991 CTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCCGACAATATGACC 38050 Query 7875 ACTGTGATGAAAAAGATGCTGGACAATACAATCGGCCAAGGTGGCAAGGACTACACACAA 7934 ||||| || || || ||| | |||| | | || ||| | || |||||| ||||| Sbjct 38051 ACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGCCTCACGGACTATTCACAA 38110 Query 7935 ATTTGCATAGCCAATCACTTTGATTATGAGAAATGGAACAATCATCAGAG 7984 || || || || || | || |||||||| |||||||| ||||| || Sbjct 38111 ATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAACCATCAAAG 38160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40420885531520