Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_022581.1 Length=11806 Score E Sequences producing significant alignments: (Bits) Value seq1383 228 6e-56 seq283 147 2e-31 >seq1383 Length=104272 Score = 228 bits (252), Expect = 6e-56 Identities = 590/881 (67%), Gaps = 30/881 (3%) Strand=Plus/Plus Query 6822 AAAGAGAGGGAACTaaaaaaaGCTGGACGGTTCTTTTCTCTAATGTCCTGGGAATTGAGG 6881 || || || ||| |||||| | ||| | ||||| ||| | ||||| |||||| | || Sbjct 8327 AAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACTCAGA 8386 Query 6882 GAGTATTTTGTAATAACTGAATACCTGATCAAAACTCATTACGTCCCTCTCTTTAAAGGA 6941 || || ||||| || || || |||||||||||| |||| || || || || ||||| Sbjct 8387 GAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTACCACTTTTCAAAGGC 8446 Query 6942 TTGACCATGGCAGATGACATGACGGAGGTCGTCAAGAAGATGTTAGAAAGAAGTCAAGGA 7001 || || ||||| || ||||||| || ||||||||||| |||| || | ||| Sbjct 8447 TTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAGCTCCCTGGGA 8506 Query 7002 CAAGGAGAGGATGATTACGAGCACGTCAGCATTGCCAACCACATTGATTATGAAAAATGG 7061 || ||| ||| ||| || || |||||||||||||| ||||||||||||||| Sbjct 8507 CAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTATGAAAAATGG 8566 Query 7062 AACAACCATCAAAGGAAAGAGTCTAACGGCCCGGTGTTCAGAGTCAT-GGGACAATTTCT 7120 ||||| || ||||| | || || | | ||| || |||| || || |||| | ||| | Sbjct 8567 AACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTGATGGGGAAATTTTTT 8626 Query 7121 GGGGTACC----CTAGTTTGATAGAAAAGACCCATGACTTCTTTGAGCAAAGCTTGATCT 7176 || |||| || ||| | | || ||| | || ||| || |||| || | | Sbjct 8627 GGATTACCAGCACT-TTTTTCTCG----TACACATCAGTTTTTTAAGGAAAGTTTAGTTT 8681 Query 7177 ATTATAATGGCAGACCTGACTTGATGCAGACAGATGGAGACGAGTTGCAAAACCGAACGG 7236 |||| |||| ||||| ||||| ||| | |||||||| || | | |||| || Sbjct 8682 ATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGAAACATT--ATACTCGAA-GG 8738 Query 7237 AAG---CTTTGGTGTGTTGGAATGGTCAGAAAGGAGGATTAGAAGGACTCAGGCAAAAAG 7293 ||| || ||| ||||||||||| ||| |||||| | ||||||||||| || | | Sbjct 8739 AAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACG 8798 Query 7294 GATGGAGCATCCTCAACCTGTTGGTCATCAAAAGAGAATCTAAAATCAGAAACACTAAAG 7353 | ||||| || | ||||| | || | | ||||||| |||||| | || || || Sbjct 8799 GGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTAATACCCGAG 8858 Query 7354 TGCAAACTTTGGCCCAGGGAGACAATCAGGTAGTGTGTACCCAATACCGCATTATGCCAA 7413 || | || ||||| || |||||||| ||||| | ||||| || || | || |||| Sbjct 8859 TGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACTA---TAAAATCCCAA 8915 Query 7414 CCAGATCG-ACACTTGAATTGCAGGCAGAACTTGA-AAAAGTTAAGA---AGAACAATCA 7468 || | | | |||| |||| | || | | | | ||| || |||||| | Sbjct 8916 CC-GTTAGAACACCTGAA-GAAAAAAAGCCCCTCATACAAGGAGCGATTCAGAACACAAA 8973 Query 7469 AGTTATTATGGATGCTATTGAGACAGGGACTAACAAATTAGGGCTACTGATAAACAATGA 7528 | || ||| |||| | | || || || || ||||| || | || || || Sbjct 8974 TGCCATCATGAATGCAGTAGTCGATGGAACAAAGAAGTTAGGATTAATCATCAATAAACG 9033 Query 7529 TGAAACCATTCAATCCGCTGATTTCCTAACCTATGGTAAGGTTCCAATATTTAGAGGTAA 7588 ||||||||| ||||| || |||| | | ||||| || || || || || ||| || Sbjct 9034 TGAAACCATACAATCAGCAGATTATATGAATTATGGCAAAGTACCGATCTTCCAAGGAAA 9093 Query 7589 TAT-TCGCTGTTTGGAAACTAAAAGATGGTCTAGAGTGACTTGTGTCACTAATGATCAAT 7647 ||| | || | ||| |||||| | ||| ||| |||| ||||| || |||||||| Sbjct 9094 TATCTTGCCG-TTGATTACTAAACGTGTGTCAAGAATGACCTGTGTGACCAATGATCAGA 9152 Query 7648 TGCCATCCCTTT-CCAATGTCATGTCATCTGTGTCGACAAA 7687 | |||| | ||| ||||| | ||| | || || ||||| Sbjct 9153 T-CCATTCATTTGAAAATGTACTCTCAGCAGTATCTACAAA 9192 Score = 138 bits (152), Expect = 9e-29 Identities = 192/269 (71%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 6807 ATCGGACTGAAGGGAAAAGAGAGGGAACTaaaaaaaGCTGGACGGTTCTTTTCTCTAATG 6866 |||||||| | | ||| || | |||| | |||| | ||||||| || || || || ||| Sbjct 21109 ATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATG 21168 Query 6867 TCCTGGGAATTGAGGGAGTATTTTGTAATAACTGAATACCTGATCAAAACTCATTACGTC 6926 || |||||| | | |||| ||||| || || ||||| || |||||| | || || Sbjct 21169 TCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTA 21228 Query 6927 CCTCTCTTTAAAGGATTGACCATGGCAGATGACATGACGGAGGTCGTCAAGAAGATGTTA 6986 || || |||||||| || || |||||||| | ||||| || | ||||| ||| || Sbjct 21229 CCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGATA 21288 Query 6987 GAAAGAAGTCAAGGACAAGGAGAGGATGATTACGAGCACGTCAGCATTGCCAACCACATT 7046 || || || || ||||||| ||| ||| || ||| || || || |||||| Sbjct 21289 GACAGTTCTCTAGAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCACATT 21348 Query 7047 GATTATGAAAAATGGAACAACCATCAAAG 7075 || ||||| |||||||| ||||||||||| Sbjct 21349 GACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 109 bits (120), Expect = 4e-20 Identities = 173/248 (70%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 6828 AGGGAACTaaaaaaaGCTGGACGGTTCTTTTCTCTAATGTCCTGGGAATTGAGGGAGTAT 6887 || ||| | |||| | ||||||| || || || || | ||| |||||| | | ||||| Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6888 TTTGTAATAACTGAATACCTGATCAAAACTCATTACGTCCCTCTCTTTAAAGGATTGACC 6947 ||||| || || ||||| || |||||| | || || || || |||||||| || || Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 6948 ATGGCAGATGACATGACGGAGGTCGTCAAGAAGATGTTAGAAAGAAGTCAAGGACAAGGA 7007 ||||| || | ||||| ||| ||||||| ||| | || ||| || |||||| | Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 7008 GAGGATGATTACGAGCACGTCAGCATTGCCAACCACATTGATTATGAAAAATGGAACAAC 7067 || || || ||| || || ||||| || || ||||| || ||||||||| Sbjct 38093 CTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAAC 38152 Query 7068 CATCAAAG 7075 |||||||| Sbjct 38153 CATCAAAG 38160 >seq283 Length=322283 Score = 147 bits (162), Expect = 2e-31 Identities = 254/364 (70%), Gaps = 4/364 (1%) Strand=Plus/Plus Query 6811 GACTGAAGGGAAAAGAGAGGGAACTaaaaaaaGCTGGACGGTTCTTTTCTCTAATGTCCT 6870 || |||| || ||||| || ||| | | ||| | | ||| || | |||||| |||| | Sbjct 271955 GATTGAAAGGGAAAGAAAGAGAAATCAGAAAGACAG-ACGATT-TCTTCTCTT-TGTCTT 272011 Query 6871 GGGAATTGAGGGAGTATTTTGTAATAACTGAATACCTGATCAAAACTCATTACGTCCCTC 6930 || |||||||| ||||| ||||| || || || || || || | | || || |||| Sbjct 272012 GGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCCTC 272071 Query 6931 TCTTTAAAGGATTGACCATGGCAGATGACATGACGGAGGTCGTCAAGAAGATGTTAGAAA 6990 |||| | | ||| ||||| |||||||||||| || || ||||| ||| | || | Sbjct 272072 TCTTCCATGTTTTG-CCATGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGACA 272130 Query 6991 GAAGTCAAGGACAAGGAGAGGATGATTACGAGCACGTCAGCATTGCCAACCACATTGATT 7050 | | |||||||||| ||| | ||| |||| || | ||||| |||||||| |||| Sbjct 272131 GTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGATT 272190 Query 7051 ATGAAAAATGGAACAACCATCAAAGGAAAGAGTCTAACGGCCCGGTGTTCAGAGTCATGG 7110 | ||||| ||||| || |||||||| | | |||| || ||||||| || |||| Sbjct 272191 ACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAATGG 272250 Query 7111 GACAATTTCTGGGGTACCCTAGTTTGATAGAAAAGACCCATGACTTCTTTGAGCAAAGCT 7170 | |||| | || | ||| | || | | |||||||||| ||||| | ||||||| Sbjct 272251 GTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTTCCAACAAAGCT 272310 Query 7171 TGAT 7174 | || Sbjct 272311 TTAT 272314 Score = 122 bits (134), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 6921 TACGTCCCTCTCTTTAAAGGATTGACCATGGCAGATGACATGACGGAGGTCGTCAAGAAG 6980 || ||||||||||| | || ||||||||||||||||||||||| || || ||||| Sbjct 273421 TATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAA 273480 Query 6981 ATGTTAGAAAGAAGTCAAGGACAAGGAGAGGATGATTACGAGCACGTCAGCATTGCCAAC 7040 ||| | | || | |||||||||| | | | |||||||| || | ||||| ||| Sbjct 273481 ATGATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAAC 273540 Query 7041 CACATTGATTATGAAAAATGGA-ACAACCATCAAAGGAAAGAGTCTAACGGCCCGGTGTT 7099 ||||| ||||| ||||||| || | || | || |||| || ||||| | || ||||| Sbjct 273541 CACATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTT 273600 Query 7100 CAGAGTCATGGGACAAT 7116 || ||| ||||| |||| Sbjct 273601 CAAAGTAATGGGTCAAT 273617 Score = 120 bits (132), Expect = 2e-23 Identities = 145/196 (74%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 6921 TACGTCCCTCTCTTTAAAGGATTGACCATGGCAGATGACATGACGGAGGTCGTCAAGAAG 6980 || ||||||||||| | || |||||||||||||||||||||| || || || || Sbjct 292274 TATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAAAAA- 292332 Query 6981 ATGTTAGAAAGAAGTCAAGGACAAGGAGAGGATGATTACGAGCACGTCAGCATTGCCAAC 7040 ||| | | || | |||||||||| | | | |||||||| || | ||||| ||| Sbjct 292333 ATGATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAAC 292392 Query 7041 CACATTGATTATGAAAAATGGAACAACCATCAAAGGAAAGAGTCTAACGGCCCGGTGTTC 7100 ||||| ||||| |||||||||||||| | || |||| | ||||| | || |||||| Sbjct 292393 CACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTC 292452 Query 7101 AGAGTCATGGGACAAT 7116 | ||| ||||| |||| Sbjct 292453 AAAGTAATGGGTCAAT 292468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37638751796360