Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_022755.1 Length=10692 Score E Sequences producing significant alignments: (Bits) Value seq1383 215 3e-52 seq283 104 2e-18 >seq1383 Length=104272 Score = 215 bits (238), Expect = 3e-52 Identities = 615/925 (66%), Gaps = 28/925 (3%) Strand=Plus/Plus Query 5920 GAAGGATTGGACCATGAAGACCTTATTATAGGCCTCAAAGCAAAGGAACGTGAGTTGAAA 5979 |||||||||| ||||| || | || || | | ||| |||||| | || | ||| Sbjct 8285 GAAGGATTGGGTAGAGAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAA 8344 Query 5980 ACCGTAGGTCGGTTCTTCTCTCTAATGTCTTGGAAATTAAGAGAATACTTCGTGATAACA 6039 | | || | ||||||||| | ||||| ||| || | ||||||||||| || || ||| Sbjct 8345 ATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACA 8404 Query 6040 GAGTATCTCAT-AAAGACTCATTTTGTTCCTTTGTTTCACGGGC-TCACCATGGCGGACG 6097 ||||| || || ||||| | ||| ||| || | ||||| ||| | || ||||||||| Sbjct 8405 GAGTACCTGATCAAAGAAT-ATTATGTACCACT-TTTCAAAGGCTTAACAATGGCGGACA 8462 Query 6098 ACCTGACAGCTGTTATGAAGAAAATGATGGAGTCATCTTCAGGACAAGGCGCCTCCGACT 6157 || |||| | || || ||||| ||||| || || ||||| || | |||| Sbjct 8463 ACATGACCACCGTGATCAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACT 8522 Query 6158 ATGATGCC--ATTGCCATTGCGAACCATATTGACTATGAAAAATGGAATAACCATCAACG 6215 | | || || || ||||| ||||| || || |||||||||||||| || || ||| | Sbjct 8523 A--CTCCCAAATCGCAATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAG 8580 Query 6216 GAAAGAATCCAATGGTCCTGTCTTCAGAGTCATGGGTCAGTTCCTAGGGTATCCA--AAT 6273 | || || | | ||||| |||| || ||||| | || | || | ||| | | Sbjct 8581 ATATGACTCAACAGCCCCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACT 8640 Query 6274 TTAATTTACCGGACGCATGAGTTTTTTGAGAATAGCCTCATATATTACAATAACAGACCC 6333 || ||| || || ||| |||||||| || | || | | ||||||||| | |||||| Sbjct 8641 TT--TTTCTCGTACACATCAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCC 8698 Query 6334 GACCTGATGA-GAGTGGTGAATAATACCGTGGA---GAACAGTTCTGATCAAAGAGTCTG 6389 ||| | |||| |||| || | || || | | || || ||| | | ||||| Sbjct 8699 GACTTAATGATCAGTGATGGAGAA-ACATTATACTCGA--AGGAAGGAT-ATTGGGTCTG 8754 Query 6390 CTGGAATGGTCAGGCAGGGGGGCTCGAAGGACTGCGGCAAAAAGGATGGAGTATATTAAA 6449 |||||||| ||| ||| |||||||||||||| | || | || |||||||||||||| Sbjct 8755 TTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAA 8814 Query 6450 TTTGCTGGTGATAGCTAGGGAATCTCAGATTAGAAACACCTCTGTCAAAACTCTGGCACA 6509 | || || ||| || |||| | | || | || ||| || || || |||| || Sbjct 8815 CCTCCTAGTACTAGAGAGAGAATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCA 8874 Query 6510 GGGGGACAATCAGGTGATTTGCACTCAATATAAGACAAAAAATTATAGAA-ATGAGAATG 6568 || ||||| ||||| || || ||||| ||||| | || ||||| | ||| Sbjct 8875 AGGAGACAACCAGGTTATATGTACTCACTATAAAATCCCAACCGTTAGAACACCTGAAGA 8934 Query 6569 AATTAGTCTGCT--TGTTAGAACAGATTAAATTGAACAATCAGGCAATCATGGACGCAAT 6626 || | | || | || | |||| | ||||| | || |||||| | ||| | Sbjct 8935 AAAAAAGCCCCTCATACAAGGAGCGATTCA---GAACACAAATGCCATCATGAATGCAGT 8991 Query 6627 AGAAACTGGGACGACCAAGCTGGGACTTATTATAAATCAGGATGAAACGATGCAATCTGC 6686 || ||| || | ||| | ||| | || || ||| | |||||| || ||||| || Sbjct 8992 AGTCGATGGAACAAAGAAGTTAGGATTAATCATCAATAAACGTGAAACCATACAATCAGC 9051 Query 6687 GGATTATCTAAATTATGGGAAGGTTCCAATATTTAGAGGAGTCATCCGAGGTCTTGAATG 6746 |||||| | |||||||| || || || || || |||| || | | |||| | Sbjct 9052 AGATTATATGAATTATGGCAAAGTACCGATCTTCCAAGGAAATAT-CTTGCCGTTGATTA 9110 Query 6747 CAAAAGATG-GTCCAGAGTGACATGTGTCACCAATGATCAACTCCCGACTTGTGCTAATT 6805 | ||| || ||| ||| |||| ||||| ||||||||||| ||| | | || ||| Sbjct 9111 CTAAACGTGTGTCAAGAATGACCTGTGTGACCAATGATCAGATCCATTCATTTGAAAATG 9170 Query 6806 TGATGTCATCAGTTTCCACCAATGC 6830 | | ||| |||| || || ||||| Sbjct 9171 TACTCTCAGCAGTATCTACAAATGC 9195 Score = 136 bits (150), Expect = 3e-28 Identities = 226/322 (70%), Gaps = 6/322 (2%) Strand=Plus/Plus Query 5895 AGAATTCTTAGAGAGCATCGACAAAGAAGGATTGGACCATGAAGACCTTATTATAGGCCT 5954 ||| ||||||| | | |||||| | ||| | ||| ||||| ||| | || || || Sbjct 21057 AGAGTTCTTAGCAGGAGTAGACAAAAATGGACTAACCCAGGAAGAACTTGTAATCGGACT 21116 Query 5955 CAAAGCAAAGGAACGTGAGTTGAAAACCGTAGGTCGGTTCTTCTCTCTAATGTCTTGGAA 6014 | |||||||||| || | |||| || || || ||||| || ||||||||| | Sbjct 21117 AAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGA 21176 Query 6015 ATTAAGAGAATACTTCGTGATAACAGAGTATCTCAT-AAAGACTCATTTTGTTCCTTTGT 6073 | || | | ||||| ||||| || || ||||| || ||||| | | | ||| || ||| Sbjct 21177 ACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAAT-ACTATGTACCGCTGT 21235 Query 6074 TTCACGGGCTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAATGATGGAGTCAT 6133 || | ||| | || ||||| ||| | |||| | ||||| ||||||||||| || | Sbjct 21236 TTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTT 21295 Query 6134 CTTCAGGACAAGGCGCCTCCGACTATGATGCC--ATTGCCATTGCGAACCATATTGACTA 6191 || || |||||| | | ||||| | || || | || || || || |||||||| Sbjct 21296 CTCTAGAACAAGGACTCACTGACTA--CTCCCAGATCACAATCGCAAATCACATTGACTA 21353 Query 6192 TGAAAAATGGAATAACCATCAA 6213 ||| |||||||||||||||||| Sbjct 21354 TGAGAAATGGAATAACCATCAA 21375 Score = 118 bits (130), Expect = 7e-23 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 5986 GGTCGGTTCTTCTCTCTAATGTCTTGGAAATTAAGAGAATACTTCGTGATAACAGAGTAT 6045 || || || ||||| || | ||||||| || || | || ||||| ||||| || || ||| Sbjct 37931 GGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTACTTTGTGATCACGGAATAT 37990 Query 6046 CTCAT-AAAGACTCATTTTGTTCCTTTGTTTCACGGGCTCACCATGGCGGACGACCTGAC 6104 || || ||||| | | | ||| || ||||| | ||| | || ||||| ||| | |||| Sbjct 37991 CTAATCAAAGAAT-ACTATGTACCGCTGTTTAAAGGGTTAACTATGGCCGACAATATGAC 38049 Query 6105 AGCTGTTATGAAGAAAATGATGGAGTCATCTTCAGGACAAGGCGCCTCCGACTATGATGC 6164 |||| || ||||||||||| || |||| |||||| || | | |||||| Sbjct 38050 CACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGCCTCACGGACTATTCACA 38109 Query 6165 CATTGCCATTGCGAACCATATTGACTATGAAAAATGGAATAACCATCAA 6213 || | || || |||||||| |||||||| || ||||| ||||||||| Sbjct 38110 AATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAACCATCAA 38158 Score = 96.9 bits (106), Expect = 2e-16 Identities = 169/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 6600 GAACAATCAGGCAATCATGGACGCAATAGAAACTGGGACGACCAAGCTGGGACTTATTAT 6659 ||||||| |||||||| | || ||| | || || | || || || || || || Sbjct 29181 GAACAATGGCACAATCATGAATGCGGTAGTAGAAGGAACAAAGAAACTTGGTCTAATAAT 29240 Query 6660 AAATCAGGATGAAACGATGCAATCTGCGGATTATCTAAATTATGGGAAGGTTCCAATATT 6719 ||| || ||| ||||| ||||| || ||||| | || |||||||| ||||| |||| Sbjct 29241 CAATGAGAGTGAGACGATCCAATCAGCAGATTACATGAACTATGGGAAAGTTCCCTTATT 29300 Query 6720 TAGAGGAGTCATCCGAGGTCTTGAATGCAAAAGATGGTCCAGAGTGACATGTGTCACCAA 6779 ||||||| ||||| | | ||| ||| ||| ||| |||| ||||| || || Sbjct 29301 TAGAGGAAACATCCTCCCATTAGTCACCAAGAGAGTGTCTAGAATGACCTGTGTAACAAA 29360 Query 6780 TGATCAACTCCCGACTTGTGCTAATTTGATGTCATCAGTTTCCACCAATGCCCTAACAGT 6839 ||||||| |||| | | ||| ||| | | || |||| || ||||| || | ||| | Sbjct 29361 TGATCAAATCCCATCCTTTGCAAATGTCCTCTCTGCAGTGTCAACCAACGCTTTGACATT 29420 Query 6840 GGCGCA 6845 ||| || Sbjct 29421 GGCACA 29426 >seq283 Length=322283 Score = 104 bits (114), Expect = 2e-18 Identities = 215/313 (69%), Gaps = 14/313 (4%) Strand=Plus/Plus Query 5992 TTCTTCTCTCTAATGTCTTGGAAATTAAGAGAATACTTCGTGATAACAGAGTATCTCATA 6051 ||||||||| | |||||||| || || ||||| ||||| || || ||||||||||| Sbjct 271996 TTCTTCTCTTT---GTCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATT 272052 Query 6052 AAGACTCATTTTGTTCCTTTGTTTCACGGGCTCACCATGGCGGACGACCTGACAGCTGTT 6111 |||| | | ||||||| | || || | | ||||| || ||| ||||| | ||| Sbjct 272053 AAGATGGAGTATGTTCCTCTCTTCCA-TGTTTTGCCATGAAAGATGACATGACATCAGTT 272111 Query 6112 ATGAAGAAAATGATGG--AGTCATCTTCAGGACAAGG---CGCCTCCGACTATGATGCCA 6166 | ||||||||||||| ||| | | | ||||||||| | | || | ||| Sbjct 272112 GTAAAGAAAATGATGGACAGT-ACCAT-AGGACAAGGACTAGATAACTACAAGCATG--- 272166 Query 6167 TTGCCATTGCGAACCATATTGACTATGAAAAATGGAATAACCATCAACGGAAAGAATCCA 6226 ||| ||||| ||||| || || || ||||| |||||||| |||||| | | || | | Sbjct 272167 TTGGAATTGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTA 272226 Query 6227 ATGGTCCTGTCTTCAGAGTCATGGGTCAGTTCCTAGGGTATCCAAATTTAATTTACCGGA 6286 || || || |||| || |||||| | ||| | || | | ||| | | |||| || Sbjct 272227 ATAAACCAGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGA 272286 Query 6287 CGCATGAGTTTTT 6299 | ||||| || || Sbjct 272287 CCCATGAATTCTT 272299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34076341473408