Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_024473.1 Length=11123 Score E Sequences producing significant alignments: (Bits) Value seq1383 203 2e-48 seq283 116 3e-22 >seq1383 Length=104272 Score = 203 bits (224), Expect = 2e-48 Identities = 605/915 (66%), Gaps = 40/915 (4%) Strand=Plus/Plus Query 6203 TGATAATTGGATTAAAGGGAAAAGAAAGAGAATTGAAAATAGCTGGGAGATTCTTCTCAT 6262 || |||| ||||||| | || ||||||||| | ||||| | || ||||||||||| | Sbjct 8307 TGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTT 8366 Query 6263 TGATGTCATGGAGATTAAGGGAATATTTTGTGATCACGGAGTACTTAATCAAAACATACT 6322 ||||||| ||| | | || ||||| ||||| ||||| |||||| | |||||| ||| | Sbjct 8367 TGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATT 8426 Query 6323 ACGTTCCCTTGTTTAAGGGGTTAACTATGGCAGATGACCTCACATCGGTGATTAAGAAGA 6382 | || || | || || || ||||| ||||| || || | || | ||||| ||||||| Sbjct 8427 ATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGA 8486 Query 6383 TGATGGACAGTTCATCAGGTCAAGGGCTCGATGATTATTCATCAGTTTGTTTGGCTAACC 6442 |||| || || || || || || | ||| || || | | | || |||| Sbjct 8487 TGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACC 8546 Query 6443 ATATTGACTACGAGAAGTGGAATAACCATCAAAGAAAGGAATCTAATGGTCCCATCTTCA 6502 | || || || || || ||||| || || |||||| | || || | | || | |||| Sbjct 8547 ACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCA 8606 Query 6503 GAGTCAT-GGGACAGTTTCTGGGTTATCCATCACTCATAGAGAGAACTCATGAATTTTTT 6561 || || |||| | ||| ||| ||| ||| |||| | | || ||| | |||||| Sbjct 8607 CTGTGATGGGGAAATTTTTTGGATTA-CCAGCACTTTTTTCTCGTACACATCAGTTTTTT 8665 Query 6562 GAGAAAAGCTTAATTTATTACAATGGGCGTCCTGATCTAATGACC---GTTCGAAATGGC 6618 || |||| ||| |||||||||||| | || || |||||| | | | || | Sbjct 8666 AAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGA---GAA 8722 Query 6619 ACATTGTGTAATTCCACTAAG--CACCGGGTTTGTTGGAATGGGCAAAAAGGAGGTTTGG 6676 |||| | || | | ||| | |||| ||||||||||| || |||||| | | Sbjct 8723 ACAT--TATACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCG 8780 Query 6677 AAGGACTAAGACAAAAGGGATGGAGTATTGTGAATCTCTTGGTTATTCAAAGGGAAGCCA 6736 ||||||| ||||| | || |||||||| | || ||| | || | | || ||| | Sbjct 8781 AAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTA 8840 Query 6737 AAATTCGAAACACAGCAGTGAAGGTCTTAGCACAGGGAGATAATCAGGTTATATGCACTC 6796 |||| || || || |||||| || || || ||||| || ||||||||||| |||| Sbjct 8841 AAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTC 8900 Query 6797 AATACAAGA---CAA-----AGAAAACCAGATCAGAATTGGAATTAAGAGCAGTCTTACA 6848 | || || | ||| |||| ||| || |||| || || | || |||| Sbjct 8901 ACTATAAAATCCCAACCGTTAGAACACCTGA--AGAA----AA--AAAGCCCCTCATACA 8952 Query 6849 ---TCAGATGGCAGGAAACAATAATAAAATCATGGAAGAAATTAAGAGA-GGGACAGAGA 6904 ||| ||| |||| ||| ||||| ||| | || || || ||| ||| Sbjct 8953 AGGAGCGAT-TCAG--AACACAAATGCCATCAT-GAATGCAGTAGTCGATGGAACAAAGA 9008 Query 6905 AGTTGGGCCTAATCATAAATGATGATGAGACTATGCAATCAGCAGACTATTTAAATTACG 6964 |||| || ||||||| ||| | ||| || || ||||||||||| ||| | ||||| | Sbjct 9009 AGTTAGGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATG 9068 Query 6965 GGAAAATTCCAATTTTCCGGGGAGTCATAAGAGGAC-TAGA-AACAAAGAGATGGTCACG 7022 | ||| | || || |||| ||| ||| | | | || || || | |||| | Sbjct 9069 GCAAAGTACCGATCTTCCAAGGA--AATATCTTGCCGTTGATTACTAAACGTGTGTCAAG 9126 Query 7023 GGTAACATGTGTCACTAATGATCAGATCCCGACATGTGCCAATTTGATGTCCTCAGTCTC 7082 | || ||||| || ||||||||||||| ||| || ||| | | || |||| || Sbjct 9127 AATGACCTGTGTGACCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATC 9186 Query 7083 CACCAATGCTTTGAC 7097 || ||||| ||||| Sbjct 9187 TACAAATGCATTGAC 9201 Score = 159 bits (176), Expect = 2e-35 Identities = 200/272 (74%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 6206 TAATTGGATTAAAGGGAAAAGAAAGAGAATTGAAAATAGCTGGGAGATTCTTCTCATTGA 6265 |||| ||| ||| | ||| |||| ||| | |||||| |||| |||| ||||| | | Sbjct 21107 TAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTA 21166 Query 6266 TGTCATGGAGATTAAGGGAATATTTTGTGATCACGGAGTACTTAATCAAAACATACTACG 6325 |||| ||| | || | | || |||||||||||||| || |||||||| |||||| | Sbjct 21167 TGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATG 21226 Query 6326 TTCCCTTGTTTAAGGGGTTAACTATGGCAGATGACCTCACATCGGTGATTAAGAAGATGA 6385 | || ||||||| ||||||||||||||||| | | || | || || ||||| |||| Sbjct 21227 TACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGA 21286 Query 6386 TGGACAGTTCATCAGGTCAAGGGCTCGATGATTATTCATCAG-TTTGTTTGGCTAACCAT 6444 | |||||||| || ||||| ||| ||| || || ||| | | || || || Sbjct 21287 TAGACAGTTCTCTAGAACAAGGACTCACTGACTACTC-CCAGATCACAATCGCAAATCAC 21345 Query 6445 ATTGACTACGAGAAGTGGAATAACCATCAAAG 6476 |||||||| ||||| ||||||||||||||||| Sbjct 21346 ATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 150 bits (166), Expect = 1e-32 Identities = 182/248 (73%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 6229 AGAGAATTGAAAATAGCTGGGAGATTCTTCTCATTGATGTCATGGAGATTAAGGGAATAT 6288 |||||| | |||||| |||| |||| ||||| | | ||| ||| | || | || || Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6289 TTTGTGATCACGGAGTACTTAATCAAAACATACTACGTTCCCTTGTTTAAGGGGTTAACT 6348 |||||||||||||| || |||||||| |||||| || || ||||||| ||||||||| Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 6349 ATGGCAGATGACCTCACATCGGTGATTAAGAAGATGATGGACAGTTCATCAGGTCAAGGG 6408 ||||| || | | || | || || ||||| ||||| ||||| || || ||| | Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 6409 CTCGATGATTATTCATCAGTTTGTTTGGCTAACCATATTGACTACGAGAAGTGGAATAAC 6468 ||| || |||||| | | | || |||||||| ||||| ||||||||||| ||| Sbjct 38093 CTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAAC 38152 Query 6469 CATCAAAG 6476 |||||||| Sbjct 38153 CATCAAAG 38160 Score = 84.2 bits (92), Expect = 2e-12 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 6894 AGGGACAGAGAAGTTGGGCCTAATCATAAATGATGATGAGACTATGCAATCAGCAGACTA 6953 ||| ||| |||| | || ||||| || ||||| |||||| || ||||||||||| || Sbjct 29214 AGGAACAAAGAAACTTGGTCTAATAATCAATGAGAGTGAGACGATCCAATCAGCAGATTA 29273 Query 6954 TTTAAATTACGGGAAAATTCCAATTTTCCGGGGAGTCATAAGAGGACTAGAAACAAAGAG 7013 | || || |||||| |||| | || | ||| ||| | ||| || ||||| Sbjct 29274 CATGAACTATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTCCCATTAGTCACCAAGAG 29333 Query 7014 ATGGTCACGGGTAACATGTGTCACTAATGATCAGATCCCGACATGTGCCAATTTGATGTC 7073 | ||| | | || ||||| || |||||||| ||||| | | ||| ||| | | || Sbjct 29334 AGTGTCTAGAATGACCTGTGTAACAAATGATCAAATCCCATCCTTTGCAAATGTCCTCTC 29393 Query 7074 CTCAGTCTCCACCAATGCTTTGAC 7097 |||| || ||||| |||||||| Sbjct 29394 TGCAGTGTCAACCAACGCTTTGAC 29417 >seq283 Length=322283 Score = 116 bits (128), Expect = 3e-22 Identities = 216/310 (70%), Gaps = 8/310 (3%) Strand=Plus/Plus Query 6205 ATAATTGGATTAAAGGGAAAAGAAAGAGAATTGAAAATAGCTGGGAGATT-CTTCTCATT 6263 ||||| |||| || || |||||||||||| | | || || | |||| |||||| || Sbjct 271948 ATAATATGATTGAAAGGGAAAGAAAGAGAAATCAGAA-AGACAGACGATTTCTTCTCTTT 272006 Query 6264 GATGTCATGGAGATTAAGGGAATATTTTGTGATCACGGAGTACTTAATCAAAACATACTA 6323 | || |||| || ||||||||||| || || || ||||| | || || | | || Sbjct 272007 G---TCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTA 272063 Query 6324 CGTTCCCTTGTTTAAGGGGTTAACTATGGCAGATGACCTCACATCGGTGATTAAGAAGAT 6383 ||||| | || | | || | ||| ||||||| | ||||| || | ||||| || Sbjct 272064 TGTTCCTCTCTTCCATGTTTTGCC-ATGAAAGATGACATGACATCAGTTGTAAAGAAAAT 272122 Query 6384 GATGGACAGTTCATCAGGTCAAGGGCTCGATGATTATTCATCA-GTTTGTTTGGCTAACC 6442 |||||||||| | ||| ||||| || ||| | || | || ||| | | ||||||| Sbjct 272123 GATGGACAGTACCATAGGACAAGGACTAGATAACTA-CAAGCATGTTGGAATTGCTAACC 272181 Query 6443 ATATTGACTACGAGAAGTGGAATAACCATCAAAGAAAGGAATCTAATGGTCCCATCTTCA 6502 | || || ||||| || |||||||| |||||||||| || ||||| || | |||| Sbjct 272182 ACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCA 272241 Query 6503 GAGTCATGGG 6512 || ||||| Sbjct 272242 ATGTAATGGG 272251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35454616921516