Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025255.1 Length=11135 Score E Sequences producing significant alignments: (Bits) Value seq1383 232 5e-57 seq283 127 1e-25 >seq1383 Length=104272 Score = 232 bits (256), Expect = 5e-57 Identities = 429/619 (69%), Gaps = 18/619 (3%) Strand=Plus/Plus Query 6258 GATGATCTTGTCATAGGACTCAAAGGGAAAGAGAGAGAATTAAAAATTGCGGGAAGATTC 6317 || || || || || ||| | | || || || |||||| ||||||| ||||||||||| Sbjct 8300 GAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTC 8359 Query 6318 TTTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTATTTGATTAAG 6377 || ||||||||||| ||| | |||||||| || ||||||||||| ||||| |||| || Sbjct 8360 TTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAA 8419 Query 6378 ACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACAGCGGTGATA 6437 | | ||| || | || ||||| || || |||||||| || |||| | ||||| Sbjct 8420 GAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATC 8479 Query 6438 AAGAAGATGATGGACACATCTTCAGGACAAGGCTTAGATAATTATGAATCC---ATTTGT 6494 ||||||||||| || | || ||||| || ||| | | | | ||| || Sbjct 8480 AAGAAGATGATAGATAGCTCCCTGGGACAGGGATTA---ACTGACTACTCCCAAATCGCA 8536 Query 6495 ATAGCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAGTCGAACGGG 6554 || |||||||| || || ||||| || ||||||||||| |||||| | || || ||| | Sbjct 8537 ATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTC-AACAGC 8595 Query 6555 CCC-GTGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAGAGAACTCA 6613 ||| || |||| |||||||| |||| || |||| ||| || || | || || Sbjct 8596 CCCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACA 8655 Query 6614 TGAATTTTTTGAGAAGAGTCTGATATATTACAATGGACGACCAGA---TCTGATGCGGGT 6670 | | |||||| || | ||| | | |||||||||| | |||| || |||| | | Sbjct 8656 TCAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGA 8715 Query 6671 TCGAGGAAATTCTCTAGTC-AACGCCTCATCTTTAAATGTCTGCTGGGAGGGTCAAGCT- 6728 | || |||| | || || || | || || ||||| ||| | || | |||| Sbjct 8716 TGGA-GAAACATTATACTCGAAGGAAGGATATT---GGGTCTGTTGGAATGGAC-AGCTA 8770 Query 6729 GGGGGATTAGAAGGACTGCGACAGAAGGGATGGAGTATTCTAAATTTGCTTGTCATTCAG 6788 || || | |||||||| ||||| | || |||||||| |||| | || || | || Sbjct 8771 GGAGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAG 8830 Query 6789 AGAGAAGCAAAAATAAGGAACACCGCCGTGAAAGTGCTAGCTCAAGGTGACAATCAGGTG 6848 |||||| |||||| | || ||| ||||| | |||||||| ||||| ||||| Sbjct 8831 AGAGAATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTT 8890 Query 6849 ATATGTACTCAGTATAAAA 6867 ||||||||||| ||||||| Sbjct 8891 ATATGTACTCACTATAAAA 8909 Score = 123 bits (136), Expect = 2e-24 Identities = 176/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 6291 AGAGAATTAAAAATTGCGGGAAGATTCTTTTCTTTGATGTCCTGGAAGCTCAGAGAGTAT 6350 |||||| | ||||| | ||| |||| || || | | ||| ||| | || | ||||| Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6351 TTTGTCATCACTGAGTATTTGATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTTGACC 6410 ||||| ||||| || ||| | || || ||| ||| ||| ||||||||||||| || Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 6411 ATGGCGGATGACTTGACAGCGGTGATAAAGAAGATGATGGACACATCTTCAGGACAAGGC 6470 ||||| || | |||| | || || ||||| ||||| |||| |||| |||||| || Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 6471 TTAGATAATTATGAATCCATTTGTATAGCCAACCATATTGACTATGAGAAGTGGAACAAT 6530 | | ||| | || || || |||||||| |||||||||||||||||||| Sbjct 38093 CTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAAC 38152 Query 6531 CATCAAAG 6538 |||||||| Sbjct 38153 CATCAAAG 38160 Score = 113 bits (124), Expect = 3e-21 Identities = 196/284 (69%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 6258 GATGATCTTGTCATAGGACTCAAAGGGAAAGAGAGAGAATTAAAAATTGCGGGAAGATTC 6317 || || ||||| || ||||| | || || || | ||| | ||||| | ||| |||| Sbjct 21097 GAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTT 21156 Query 6318 TTTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTATTTGATTAAG 6377 || || | ||||| ||| | || | |||| ||||| ||||| || ||| | || || Sbjct 21157 TTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAA 21216 Query 6378 ACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACAGCGGTGATA 6437 ||| ||| ||| ||||||||||||| || ||||| || | |||| | || ||| Sbjct 21217 GAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATA 21276 Query 6438 AAGAAGATGATGGACACATCTTCAGGACAAGGCTTAGATAATTATGAATCC---ATTTGT 6494 ||||| ||||| |||| ||| || |||||| | | | | | ||| || Sbjct 21277 AAGAAAATGATAGACAGTTCTCTAGAACAAGG---ACTCACTGACTACTCCCAGATCACA 21333 Query 6495 ATAGCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAG 6538 || || || || |||||||||||||| ||||| || |||||||| Sbjct 21334 ATCGCAAATCACATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 82.4 bits (90), Expect = 5e-12 Identities = 123/173 (71%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 6956 AGGCACCGAGAAACTGGGTCTTTTGATTAATGATGATGAGACAATGCAATCTGCTGATTA 7015 ||| || ||||||| ||||| | || ||||| |||||| || ||||| || ||||| Sbjct 29214 AGGAACAAAGAAACTTGGTCTAATAATCAATGAGAGTGAGACGATCCAATCAGCAGATTA 29273 Query 7016 CCTCAATTACGGGAAGGTTCCCATTTTCAGAGGAGTAATCAGAGGCCTTGAGACA--AAA 7073 | | || || ||||| |||||| | || |||||| ||| || | || || || Sbjct 29274 CATGAACTATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTC--CCATTAGTCACCAAG 29331 Query 7074 AGATGGTCACGCGTGACCTGTGTGACAAATGATCAGATTCCAACGTGTGCGAA 7126 ||| ||| | |||||||||| ||||||||||| || ||| | | ||| || Sbjct 29332 AGAGTGTCTAGAATGACCTGTGTAACAAATGATCAAATCCCATCCTTTGCAAA 29384 >seq283 Length=322283 Score = 127 bits (140), Expect = 1e-25 Identities = 223/320 (70%), Gaps = 6/320 (2%) Strand=Plus/Plus Query 6270 ATAGGACTCAAAGGGAAAGAGAGAGAATTAAAAATTGCGGGAAGA-TTCTTTTCTTTGAT 6328 ||| || | ||||||||||| |||||| | | || | || || ||||| |||| | Sbjct 271951 ATATGATTGAAAGGGAAAGAAAGAGAAATCAGAA-AGACAGACGATTTCTTCTCTT---T 272006 Query 6329 GTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTATTTGATTAAGACGCACTTTGT 6388 ||| |||| | || || ||||| || || || |||||| | ||||||| | | | ||| Sbjct 272007 GTCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGT 272066 Query 6389 CCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACAGCGGTGATAAAGAAGATGAT 6448 || | || | | ||| ||||| |||||| ||||| | || ||||||| ||||| Sbjct 272067 TCCTCTCTTCCATGTTTTG-CCATGAAAGATGACATGACATCAGTTGTAAAGAAAATGAT 272125 Query 6449 GGACACATCTTCAGGACAAGGCTTAGATAATTATGAATCCATTTGTATAGCCAACCATAT 6508 ||||| | ||||||||| ||||||| || | || | || || ||||| || Sbjct 272126 GGACAGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCACAT 272185 Query 6509 TGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAGTCGAACGGGCCCGTGTTCAAGGT 6568 || || || || ||||| || |||||||||| | | || || |||||||| || Sbjct 272186 CGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGT 272245 Query 6569 GATGGGTCAATTCTTGGGAT 6588 |||||| ||||||| |||| Sbjct 272246 AATGGGTAAATTCTTTGGAT 272265 Score = 96.9 bits (106), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 6371 GATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACAGC 6430 |||| ||| | | | |||||| | || | || ||||||||||| |||||| ||| | | Sbjct 292261 GATTTAGATGGAGTATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATC 292320 Query 6431 GGTGATAAAGAAGATGATGGACACATCTTCAGGACAAGGCTTAGATAATTATGAATCCAT 6490 || |||| || ||||||| || | |||||||||| ||| ||| || || | Sbjct 292321 AGTTGTAAA-AAAATGATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGT 292379 Query 6491 TTGTATAGCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAGTCGAA 6550 | | || || ||||| || || || || || |||||||||| || || | | || || Sbjct 292380 TGGAATTGCTAACCACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAA 292439 Query 6551 CGGGCCCGTGTTCAAGGTGATGGGTCAATTCTT 6583 | || |||||||| || |||||||||| ||| Sbjct 292440 TGAACCAGTGTTCAAAGTAATGGGTCAATCCTT 292472 Score = 95.1 bits (104), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 6371 GATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACAGC 6430 |||| ||| | | | |||||| | || | || ||||||||||| |||||| ||||| | Sbjct 273408 GATTTAGATGGAGTATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATC 273467 Query 6431 GGTGATAAAGAAGATGATGGACACATCTTCAGGACAAGGCTTAGATAATTATGAATCCAT 6490 || ||||||| ||||||| || | ||||||||| ||| ||| || || | Sbjct 273468 AGTTGTAAAGAAAATGATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGT 273527 Query 6491 TTGTATAGCCAACCATATTGACTATGAGAAGTGGA-ACAATCATCAAAGAAAAGAGTCGA 6549 | | || || ||||| || || || || || | || | |||| || || | || || | Sbjct 273528 TGGAATTGCTAACCACATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTA 273587 Query 6550 ACGGGCCCGTGTTCAAGGTGATGGGTCAATTCTT 6583 | | || |||||||| || |||||||||| ||| Sbjct 273588 ATGAACCAGTGTTCAAAGTAATGGGTCAATCCTT 273621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35492991179932