Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025340.1 Length=11176 Score E Sequences producing significant alignments: (Bits) Value seq1383 111 1e-20 >seq1383 Length=104272 Score = 111 bits (122), Expect = 1e-20 Identities = 252/371 (68%), Gaps = 10/371 (3%) Strand=Plus/Plus Query 6246 GAAGATCTTGTAATCGGGTTGAAACCAAAAGAAAGGGAGTTAAAGGACGAAGGTCGATTT 6305 ||||| || |||||||| || | | | || ||||| || |||| | || |||| Sbjct 8300 GAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTC 8359 Query 6306 TTCTCTCTCATGGGTTGGAATCTGAGGTTGTACTTTGTTATCACTGAGTACCTCATTAAA 6365 |||||| | ||| ||| | || || |||||||| ||||| |||||||| || ||| Sbjct 8360 TTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAA 8419 Query 6366 AAACTCTTTGTCCCACTATTCAAAGGGCTCACCATGGCTGACGACCTCAACACTGTCACT 6425 || | ||| ||||| |||||||| | || ||||| ||| || | | ||| || | Sbjct 8420 GAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATC 8479 Query 6426 AAGAAGATGATCGCT-GC-AACTGAAGGCCAGGGGCTATGTGATTACTCACGTGTGTACA 6483 ||||||||||| | | || ||| || ||||| || ||| ||||| | | | Sbjct 8480 AAGAAGATGATAGATAGCTCCCTG--GGACAGGGATTAACTGACTACTCCCAAATCGCAA 8537 Query 6484 TAGCCAATTCAC-TTGATTATGAGAAGTGGAACAACAATCAACGATACGAGTC--CAACC 6540 | ||||| ||| | |||||||| || |||||||| | ||| |||| || || || || Sbjct 8538 TTGCCAA-CCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCC 8596 Query 6541 AACATGTGTTTCGAGTTATGGGGAAGTTTTTGGGCCTCCCAGAGATATTCTCATTGACAC 6600 | ||| || || |||||||| ||||| || | |||| | || || |||| Sbjct 8597 --CCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACAC 8654 Query 6601 ACAAGTTTTTT 6611 | |||||||| Sbjct 8655 ATCAGTTTTTT 8665 Score = 87.8 bits (96), Expect = 1e-13 Identities = 191/281 (68%), Gaps = 4/281 (1%) Strand=Plus/Plus Query 6246 GAAGATCTTGTAATCGGGTTGAAACCAAAAGAAAGGGA-GTTAAAGGACGAAGGTCGATT 6304 ||||| ||||||||||| | | | |||| |||| ||| || ||| | || ||||| Sbjct 21097 GAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCT-GGACGATT 21155 Query 6305 TTTCTCTCTCATGGGTTGGAATCTGAGGTTGTACTTTGTTATCACTGAGTACCTCATTAA 6364 |||||| || ||| |||| | || | ||||||||| ||||| || || || || || Sbjct 21156 TTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAA 21215 Query 6365 AAAACTCTTTGTCCCACTATTCAAAGGGCTCACCATGGCTGACGACCTCAACACTGTCAC 6424 | || || ||| || || || |||||| | || ||||| ||| | | | || || | Sbjct 21216 AGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTAT 21275 Query 6425 TAAGAAGATGATCGCTGCAACTGAAGGCCAGGGGCTATGTGATTACTCACGTGTGTACAT 6484 ||||| ||||| | || || || || || ||| ||||| | | ||| Sbjct 21276 AAAGAAAATGATAGACAGTTCTCTAGAACAAGGACTCACTGACTACTC-CCAGATCACAA 21334 Query 6485 AGCCAATTCAC-TTGATTATGAGAAGTGGAACAACAATCAA 6524 ||| |||| |||| |||||||| ||||| ||| ||||| Sbjct 21335 TCGCAAATCACATTGACTATGAGAAATGGAATAACCATCAA 21375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35624103229520