Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025341.1 Length=11139 Score E Sequences producing significant alignments: (Bits) Value seq1383 242 3e-60 seq283 131 1e-26 >seq1383 Length=104272 Score = 242 bits (268), Expect = 3e-60 Identities = 579/865 (67%), Gaps = 24/865 (3%) Strand=Plus/Plus Query 6270 ATCGGATTGAAAGGGAAAGAGAGAGAAGTGAAAGTAAAAGGACGGTTCTTTTCACTCATG 6329 |||||||| | || || || |||||||| ||| | ||| | ||||| || | ||| Sbjct 8312 ATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATG 8371 Query 6330 TCGTGGAAACTAAGAGAATATTTTGTTGTCACAGAATACCTAATCAAAGAACATTTCGTC 6389 |||||| |||| |||||||| ||||| ||||||| ||||| ||||||||| ||| || Sbjct 8372 TCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTA 8431 Query 6390 CCTCTCTTCAATGGATTGACTATGGCGGATGACATGACCACCGTAATATCAAAACTAATG 6449 || || ||||| || || || |||||||| ||||||||||||| || || | || Sbjct 8432 CCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATA 8491 Query 6450 GATCGCACTCAGGGCCAAGGAGGAGAGGACTACACCCAAGTTTGCATTGCTAATCATATC 6509 ||| || | | ||| || ||| | |||||| ||||| | ||||| || || ||| Sbjct 8492 GATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATC 8551 Query 6510 GATTATGAAAAGTGGAACAATCATCAGAGAAAGCGTGCAACCGGACCTGTGTTCATAGTC 6569 ||||||||||| ||||||||||| || ||| | |||| | ||||| |||| || Sbjct 8552 GATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTG 8611 Query 6570 ATGGGACAATTCCTTGGATTTCCTAAACTGATCTATAGAACACATGAGTTCTTTGAATCT 6629 ||||| |||| ||||||| || ||| | | | | |||||| |||| ||| | Sbjct 8612 ATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTAAGGAA 8671 Query 6630 AGCTGGGTGTATTACAATGCTAGACCTGATTTAATGGTCATCCGAGATGG-GAGATTAGA 6688 || | || |||||||||| ||||| || |||||| ||| | ||||| || | | Sbjct 8672 AGTTTAGTTTATTACAATGAAAGACCCGACTTAATG---ATCAGTGATGGAGAAACATTA 8728 Query 6689 AAATCTAGGTCCTGAAAT--AGTTTGTTGGAATGGACAAGATGGGGGGTTAGAAGGGCTA 6746 | || | | || || || |||||||||||||| || ||| | ||||| || Sbjct 8729 TACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTC 8788 Query 6747 CGACAGAAAGGATGGACAGTGGTCGGGTTACTCATGATACGGAGAGAAGCTAGGGTTAGA 6806 ||||| | || |||| | | | || | || ||||||| || | | Sbjct 8789 AGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGT 8848 Query 6807 AACACCGCTGTCAAGATACTGGCTCAGGGAGATAATCAGGTGATTTGTTCTCA--ATATA 6864 || ||| || || | | ||||||| ||||| || ||||| || ||| |||| ||| | Sbjct 8849 AATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACTATAAA 8908 Query 6865 AGCTCAAACCTTATGTGAATGAACTTGATCTGAGAA-----CTAAT-CTAAGAGCTATAT 6918 | | ||| | ||| ||| || ||| | || || || | | |||| || Sbjct 8909 ATCCCAACCGTTA---GAA--CACCTGAAGAAAAAAAGCCCCTCATACAAGGAGCGAT-- 8961 Query 6919 GGGAGAACAACAATTCCATCATGGCGGCTATTGTCAAGGGTACTAACAAGCTTGGGTTAA 6978 |||||| ||| |||||||| || | ||| | || || || ||| | || |||| Sbjct 8962 -TCAGAACACAAATGCCATCATGAATGCAGTAGTCGATGGAACAAAGAAGTTAGGATTAA 9020 Query 6979 TCATTAATGAGGATGAGACTATGCAATCAGCTGACTATCTAAACTACGGGAAAATTCCTG 7038 |||| ||| | ||| || || |||||||| || ||| | || || || ||| | || Sbjct 9021 TCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGCAAAGTACCGA 9080 Query 7039 TGTT-CAGGGGAAGAATTCTCAATTTATTCACTAAAAGACTTTCTAGGATCATGTGCGTG 7097 | || || || || | | | || ||| |||||| | | || || || | || ||| Sbjct 9081 TCTTCCAAGGAAATATCTTGCCGTTGATT-ACTAAACGTGTGTCAAGAATGACCTGTGTG 9139 Query 7098 ACAAATGACCAGATACTATCATATG 7122 || ||||| ||||| | |||| || Sbjct 9140 ACCAATGATCAGATCCATTCATTTG 9164 Score = 118 bits (130), Expect = 8e-23 Identities = 175/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 6291 AGAGAAGTGAAAGTAAAAGGACGGTTCTTTTCACTCATGTCGTGGAAACTAAGAGAATAT 6350 |||||||| ||| || ||||| || || || || | ||| ||| ||||| | || || Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6351 TTTGTTGTCACAGAATACCTAATCAAAGAACATTTCGTCCCTCTCTTCAATGGATTGACT 6410 ||||| |||| ||||| |||||||||||| | | || || || || || || || ||| Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 6411 ATGGCGGATGACATGACCACCGTAATATCAAAACTAATGGATCGCACTCAGGGCCAAGGA 6470 ||||| || | |||||||| || || ||| | || || | ||| ||| ||| | Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 6471 GGAGAGGACTACACCCAAGTTTGCATTGCTAATCATATCGATTATGAAAAGTGGAACAAT 6530 |||||| | ||| | || || || |||||||| ||||| ||||||||||| Sbjct 38093 CTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAAC 38152 Query 6531 CATCAGAG 6538 ||||| || Sbjct 38153 CATCAAAG 38160 Score = 102 bits (112), Expect = 6e-18 Identities = 184/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 6270 ATCGGATTGAAAGGGAAAGAGAGAGAAGTGAAAGTAAAAGGACGGTTCTTTTCACTCATG 6329 |||||| | | || || || | ||||| ||| || ||||| || || || || ||| Sbjct 21109 ATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATG 21168 Query 6330 TCGTGGAAACTAAGAGAATATTTTGTTGTCACAGAATACCTAATCAAAGAACATTTCGTC 6389 || ||| ||||| | | || ||||| |||| ||||| |||||||||||| | | || Sbjct 21169 TCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTA 21228 Query 6390 CCTCTCTTCAATGGATTGACTATGGCGGATGACATGACCACCGTAATATCAAAACTAATG 6449 || || || || || || |||||||| || | ||||| || || ||| ||| | || Sbjct 21229 CCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGATA 21288 Query 6450 GATCGCACTCAGGGCCAAGGAGGAGAGGACTACACCCAAGTTTGCATTGCTAATCATATC 6509 || | ||| | |||||| |||||| |||| | || || ||||| || Sbjct 21289 GACAGTTCTCTAGAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCACATT 21348 Query 6510 GATTATGAAAAGTGGAACAATCATCAGAG 6538 || ||||| || ||||| || ||||| || Sbjct 21349 GACTATGAGAAATGGAATAACCATCAAAG 21377 >seq283 Length=322283 Score = 131 bits (144), Expect = 1e-26 Identities = 243/351 (69%), Gaps = 8/351 (2%) Strand=Plus/Plus Query 6274 GATTGAAAGGGAAAGAGAGAGAAGT--GAAAGTAAAAGGACGGTTCTTTTCACTCATGTC 6331 |||||||||||||||| |||||| | ||||| | |||| || | ||| || |||| Sbjct 271955 GATTGAAAGGGAAAGAAAGAGAAATCAGAAAGACA---GACGATT-TCTTCTCTT-TGTC 272009 Query 6332 GTGGAAACTAAGAGAATATTTTGTTGTCACAGAATACCTAATCAAAGAACATTTCGTCCC 6391 |||| | || |||||||| || | || || || || || || | | || || Sbjct 272010 TTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCC 272069 Query 6392 TCTCTTCAATGGATTGACTATGGCGGATGACATGACCACCGTAATATCAAAACTAATGGA 6451 ||||||| ||| ||| | ||| ||||||||||| | || || ||| | ||||| Sbjct 272070 TCTCTTCCATGTTTTGCC-ATGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGA 272128 Query 6452 TCGCACTCAGGGCCAAGGAGGAGAGGACTACACCCAAGTTTGCATTGCTAATCATATCGA 6511 | || || |||||| ||| |||||| || ||| | |||||||| || ||||| Sbjct 272129 CAGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGA 272188 Query 6512 TTATGAAAAGTGGAACAATCATCAGAGAAAGCGTGCAACCGGACCTGTGTTCATAGTCAT 6571 ||| ||||| ||||| || ||||| |||| || | ||| ||||||| || || Sbjct 272189 TTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAAT 272248 Query 6572 GGGACAATTCCTTGGATTTCCTAAACTGATCTATAGAACACATGAGTTCTT 6622 ||| ||||| ||||||| |||| ||| |||| || ||||| ||||| Sbjct 272249 GGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTT 272299 Score = 102 bits (112), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 6387 GTCCCTCTCTTCAATGGATTGACTATGGCGGATGACATGACCACCGTAATATCAAAACTA 6446 |||||||||||| |||| ||||| ||||| |||||||||| | || || |||| | Sbjct 292277 GTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTA-AAAAAATG 292335 Query 6447 ATGGATCGCACTCAGGGCCAAGGAGGAGAGGACTACACCCAAGTTTGCATTGCTAATCAT 6506 |||| | || || |||||| || ||||| || ||| | |||||||| || Sbjct 292336 ATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAACCAC 292395 Query 6507 ATCGATTATGAAAAGTGGAACAATCATCAGAGAAAGCGTGCAACCGGACCTGTGTTCATA 6566 |||||||| ||||| |||||||||| ||||| | | | | ||| ||||||| | Sbjct 292396 ATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTCAAA 292455 Query 6567 GTCATGGGACAATTCCTTGGATT 6589 || ||||| |||| | || |||| Sbjct 292456 GTAATGGGTCAATCCTTTAGATT 292478 Score = 95.1 bits (104), Expect = 9e-16 Identities = 166/238 (70%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 6387 GTCCCTCTCTTCAATGGATTGACTATGGCGGATGACATGACCACCGTAATATCAAAACTA 6446 |||||||||||| |||| ||||| ||||| ||||||||||| | || || ||| | Sbjct 273424 GTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAAATG 273483 Query 6447 ATGGATCGCACTCAGGGCCAAGGAGGAGAGGACTACACCCAAGTTTGCATTGCTAATCAT 6506 |||| | || || |||||| || ||||| || ||| | |||||||| || Sbjct 273484 ATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAACCAC 273543 Query 6507 ATCGATTATGAAAAGTGGA-ACAATCATCAGAGAAAGCGTGCAACCGGACCTGTGTTCAT 6565 |||||||| ||||| | || | |||| ||||| | | | | ||| ||||||| Sbjct 273544 ATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTTCAA 273603 Query 6566 AGTCATGGGACAATTCCTTGGATTTCCTAAACTGATCT-ATAGAACACATGAGTTCTT 6622 ||| ||||| |||| | || |||| ||| ||| ||| ||| || |||| ||||| Sbjct 273604 AGTAATGGGTCAATCCTTTAGATTGGTTAACCTGTTCTGCCAGACCA-ATGAATTCTT 273660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35505782599404