Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19]
59,587 sequences; 511,738,253 total letters
Query= NC_025342.1
Length=11120
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 248 6e-62
seq283 154 1e-33
>seq1383
Length=104272
Score = 248 bits (274), Expect = 6e-62
Identities = 580/857 (68%), Gaps = 30/857 (4%)
Strand=Plus/Plus
Query 6249 ATTGGGTTAAAAGGGAAAGAGCGTGAAGTAAAAATTAAGGGACGATTCTTCTCTTTGATG 6308
|| || |||| || || || | ||||||||||| |||| |||||||||||||||||
Sbjct 8312 ATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATG 8371
Query 6309 TCTTGGAGATTGAGGGAATATTTCGTTGTTACAGAATATCTTATAAAGGAGCATTTCGTC 6368
|| ||| | | || ||||| || || | ||||| || || || || || ||| ||
Sbjct 8372 TCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTA 8431
Query 6369 CCATTATTCAATGGGTTGACAATGGCAGATGACATGACGACAGTGATATCGAAATTGATG 6428
||| | ||||| || || |||||||| || ||||||| || ||||| ||| ||||
Sbjct 8432 CCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATA 8491
Query 6429 GACAGAACCCAAGGTCAGGGCGGAGAGGACTACACACAAATCTGCATCGCCAATCACATT 6488
|| || ||| || ||||| | |||||| | |||||| || ||||| |||||
Sbjct 8492 GATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATC 8551
Query 6489 GACTATGAAAAATGGAACAATCATCAAAGAAAGGACGCCACCGGCCCTGTCTTTAAGGTC 6548
|| |||||||||||||||||||| |||||| | ||| | || | |||||| || | ||
Sbjct 8552 GATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTG 8611
Query 6549 ATGGGACAGTTCTTGGGATTACCA--AATTTAATCTATCGAACACATGAGTTCTTTGAAC 6606
||||| | || || ||||||||| | ||| | | ||| |||||| |||| ||| |
Sbjct 8612 ATGGGGAAATTTTTTGGATTACCAGCACTTT--TTTCTCGTACACATCAGTTTTTTAAGG 8669
Query 6607 AGAGCTGGATTTATTATAATGGTAGGCCTGATTTGATG-GCAGTTGTTGATGGGCGACTG 6665
| || | ||||||| |||| || || || || ||| ||| |||| || ||
Sbjct 8670 AAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAG----TGAT-GGAGAAAC 8724
Query 6666 ATCA-ACTC--TGGAACCA-ATATAGTCTGTTGGGACGGTCAAGCT-GGAGGGTTAGAAG 6720
|| | |||| |||| | || ||||||||| | || | |||| |||||| | ||||
Sbjct 8725 ATTATACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGAC-AGCTAGGAGGGCTCGAAG 8783
Query 6721 GATTGAGACAGAAGGGTTGGACGGTTGTAGGACTCTTGATGATCATAAGAGAAGCTAGAG 6780
|| | |||||| | || |||| | || ||| | | | |||||| || |
Sbjct 8784 GACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAA 8843
Query 6781 TTCGTAACACAGCTGTCAAAATTTTGGCTCAGGGAGACAACCAAGTGATCTGCACTCAGT 6840
| ||||| || || || | |||||||| ||||||||||| || || || ||||| |
Sbjct 8844 TACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACT 8903
Query 6841 ATAAGCT-CCGCCCTTCAGA--AAGTGAACTAGATCTGCGGGTCA-ATTTGCAGTCAATA 6896
|||| | || || | ||| | |||| | | || ||| | | || | ||
Sbjct 8904 ATAAAATCCCAACCGTTAGAACACCTGAAGAAAAAAAGCCCCTCATACAAGGAG-CGAT- 8961
Query 6897 TGGGAGAACAATAATGCAATTATG---GCAGCTATCAATCAAGGAACGAATAAATTGGGA 6953
|||||| ||||| || ||| |||| || || ||||| || || || |||
Sbjct 8962 --TCAGAACACAAATGCCATCATGAATGCAGTAGTCGAT---GGAACAAAGAAGTTAGGA 9016
Query 6954 TTGATTATTAATGAGGACGAAACTATGCAGTCTGCAGATTATTTAAATTATGGAAAGATT 7013
|| || || ||| | ||||| || || || ||||||||| | |||||||| || |
Sbjct 9017 TTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGCAAAGTA 9076
Query 7014 CCGGTCTTTAGAGGCAGAATTTTGAATTTATTTACTAAACGCTTATCTCGAATTATGTGT 7073
||| |||| ||| | || ||| || |||||||||| | || |||| | |||
Sbjct 9077 CCGATCTTCCAAGGAAATATCTTGCCGTTGATTACTAAACGTGTGTCAAGAATGACCTGT 9136
Query 7074 GTCACAAATGACCAAAT 7090
|| || ||||| || ||
Sbjct 9137 GTGACCAATGATCAGAT 9153
Score = 118 bits (130), Expect = 8e-23
Identities = 173/245 (71%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 6273 GAAGTAAAAATTAAGGGACGATTCTTCTCTTTGATGTCTTGGAGATTGAGGGAATATTTC 6332
||||| ||||| |||||||| ||||| | ||||||||| | | | | || ||
Sbjct 21133 GAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTT 21192
Query 6333 GTTGTTACAGAATATCTTATAAAGGAGCATTTCGTCCCATTATTCAATGGGTTGACAATG 6392
|| | || |||||||| || || || | | || || | || || ||||| || |||
Sbjct 21193 GTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATG 21252
Query 6393 GCAGATGACATGACGACAGTGATATCGAAATTGATGGACAGAACCCAAGGTCAGGGCGGA 6452
||||| | ||||| ||||| ||| |||| |||| ||||| | | || || ||
Sbjct 21253 GCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCTAGAACAAGGACTC 21312
Query 6453 GAGGACTACACACAAATCTGCATCGCCAATCACATTGACTATGAAAAATGGAACAATCAT 6512
|||||| | || ||| ||||| ||||||||||||||||| |||||||| || |||
Sbjct 21313 ACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAAATGGAATAACCAT 21372
Query 6513 CAAAG 6517
|||||
Sbjct 21373 CAAAG 21377
>seq283
Length=322283
Score = 154 bits (170), Expect = 1e-33
Identities = 263/377 (70%), Gaps = 6/377 (2%)
Strand=Plus/Plus
Query 6237 AATGATCTCATCATTGGGTTAAAAGGGAAAGAGCGTGAAGTAAAAATTAAGGGACGATT- 6295
|| || || || || | || ||||||||||| | ||| | | || | | ||||||
Sbjct 271939 AAAGAACTAATAATATGATTGAAAGGGAAAGAAAGAGAAATCAGAAAGACAG-ACGATTT 271997
Query 6296 CTTCTCTTTGATGTCTTGGAGATTGAGGGAATATTTCGTTGTTACAGAATATCTTATAAA 6355
|||||||||| ||||||| ||||||||||||||||| |||| || ||||| || ||
Sbjct 271998 CTTCTCTTTG---TCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAA 272054
Query 6356 GGAGCATTTCGTCCCATTATTCAATGGGTTGACAATGGCAGATGACATGACGACAGTGAT 6415
| | | | || || | ||| ||| ||| || || |||||||||||| |||| |
Sbjct 272055 GATGGAGTATGTTCCTCTCTTCCATGTTTTGCCA-TGAAAGATGACATGACATCAGTTGT 272113
Query 6416 ATCGAAATTGATGGACAGAACCCAAGGTCAGGGCGGAGAGGACTACACACAAATCTGCAT 6475
| |||| |||||||||| ||| ||| || || ||| |||||| || | | ||
Sbjct 272114 AAAGAAAATGATGGACAGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAAT 272173
Query 6476 CGCCAATCACATTGACTATGAAAAATGGAACAATCATCAAAGAAAGGACGCCACCGGCCC 6535
|| || ||||| || || ||||| ||||| || |||||||||| | || | ||
Sbjct 272174 TGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACC 272233
Query 6536 TGTCTTTAAGGTCATGGGACAGTTCTTGGGATTACCAAATTTAATCTATCGAACACATGA 6595
|| || || || ||||| | ||||| ||||| | ||| | |||| | || |||||
Sbjct 272234 AGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGA 272293
Query 6596 GTTCTTTGAACAGAGCT 6612
||||| |||| ||||
Sbjct 272294 ATTCTTCCAACAAAGCT 272310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35445023356912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |