Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025342.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq1383 248 6e-62 seq283 154 1e-33 >seq1383 Length=104272 Score = 248 bits (274), Expect = 6e-62 Identities = 580/857 (68%), Gaps = 30/857 (4%) Strand=Plus/Plus Query 6249 ATTGGGTTAAAAGGGAAAGAGCGTGAAGTAAAAATTAAGGGACGATTCTTCTCTTTGATG 6308 || || |||| || || || | ||||||||||| |||| ||||||||||||||||| Sbjct 8312 ATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATG 8371 Query 6309 TCTTGGAGATTGAGGGAATATTTCGTTGTTACAGAATATCTTATAAAGGAGCATTTCGTC 6368 || ||| | | || ||||| || || | ||||| || || || || || ||| || Sbjct 8372 TCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTA 8431 Query 6369 CCATTATTCAATGGGTTGACAATGGCAGATGACATGACGACAGTGATATCGAAATTGATG 6428 ||| | ||||| || || |||||||| || ||||||| || ||||| ||| |||| Sbjct 8432 CCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATA 8491 Query 6429 GACAGAACCCAAGGTCAGGGCGGAGAGGACTACACACAAATCTGCATCGCCAATCACATT 6488 || || ||| || ||||| | |||||| | |||||| || ||||| ||||| Sbjct 8492 GATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATC 8551 Query 6489 GACTATGAAAAATGGAACAATCATCAAAGAAAGGACGCCACCGGCCCTGTCTTTAAGGTC 6548 || |||||||||||||||||||| |||||| | ||| | || | |||||| || | || Sbjct 8552 GATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTG 8611 Query 6549 ATGGGACAGTTCTTGGGATTACCA--AATTTAATCTATCGAACACATGAGTTCTTTGAAC 6606 ||||| | || || ||||||||| | ||| | | ||| |||||| |||| ||| | Sbjct 8612 ATGGGGAAATTTTTTGGATTACCAGCACTTT--TTTCTCGTACACATCAGTTTTTTAAGG 8669 Query 6607 AGAGCTGGATTTATTATAATGGTAGGCCTGATTTGATG-GCAGTTGTTGATGGGCGACTG 6665 | || | ||||||| |||| || || || || ||| ||| |||| || || Sbjct 8670 AAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAG----TGAT-GGAGAAAC 8724 Query 6666 ATCA-ACTC--TGGAACCA-ATATAGTCTGTTGGGACGGTCAAGCT-GGAGGGTTAGAAG 6720 || | |||| |||| | || ||||||||| | || | |||| |||||| | |||| Sbjct 8725 ATTATACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGAC-AGCTAGGAGGGCTCGAAG 8783 Query 6721 GATTGAGACAGAAGGGTTGGACGGTTGTAGGACTCTTGATGATCATAAGAGAAGCTAGAG 6780 || | |||||| | || |||| | || ||| | | | |||||| || | Sbjct 8784 GACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAA 8843 Query 6781 TTCGTAACACAGCTGTCAAAATTTTGGCTCAGGGAGACAACCAAGTGATCTGCACTCAGT 6840 | ||||| || || || | |||||||| ||||||||||| || || || ||||| | Sbjct 8844 TACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACT 8903 Query 6841 ATAAGCT-CCGCCCTTCAGA--AAGTGAACTAGATCTGCGGGTCA-ATTTGCAGTCAATA 6896 |||| | || || | ||| | |||| | | || ||| | | || | || Sbjct 8904 ATAAAATCCCAACCGTTAGAACACCTGAAGAAAAAAAGCCCCTCATACAAGGAG-CGAT- 8961 Query 6897 TGGGAGAACAATAATGCAATTATG---GCAGCTATCAATCAAGGAACGAATAAATTGGGA 6953 |||||| ||||| || ||| |||| || || ||||| || || || ||| Sbjct 8962 --TCAGAACACAAATGCCATCATGAATGCAGTAGTCGAT---GGAACAAAGAAGTTAGGA 9016 Query 6954 TTGATTATTAATGAGGACGAAACTATGCAGTCTGCAGATTATTTAAATTATGGAAAGATT 7013 || || || ||| | ||||| || || || ||||||||| | |||||||| || | Sbjct 9017 TTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGCAAAGTA 9076 Query 7014 CCGGTCTTTAGAGGCAGAATTTTGAATTTATTTACTAAACGCTTATCTCGAATTATGTGT 7073 ||| |||| ||| | || ||| || |||||||||| | || |||| | ||| Sbjct 9077 CCGATCTTCCAAGGAAATATCTTGCCGTTGATTACTAAACGTGTGTCAAGAATGACCTGT 9136 Query 7074 GTCACAAATGACCAAAT 7090 || || ||||| || || Sbjct 9137 GTGACCAATGATCAGAT 9153 Score = 118 bits (130), Expect = 8e-23 Identities = 173/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 6273 GAAGTAAAAATTAAGGGACGATTCTTCTCTTTGATGTCTTGGAGATTGAGGGAATATTTC 6332 ||||| ||||| |||||||| ||||| | ||||||||| | | | | || || Sbjct 21133 GAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTT 21192 Query 6333 GTTGTTACAGAATATCTTATAAAGGAGCATTTCGTCCCATTATTCAATGGGTTGACAATG 6392 || | || |||||||| || || || | | || || | || || ||||| || ||| Sbjct 21193 GTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATG 21252 Query 6393 GCAGATGACATGACGACAGTGATATCGAAATTGATGGACAGAACCCAAGGTCAGGGCGGA 6452 ||||| | ||||| ||||| ||| |||| |||| ||||| | | || || || Sbjct 21253 GCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCTAGAACAAGGACTC 21312 Query 6453 GAGGACTACACACAAATCTGCATCGCCAATCACATTGACTATGAAAAATGGAACAATCAT 6512 |||||| | || ||| ||||| ||||||||||||||||| |||||||| || ||| Sbjct 21313 ACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAAATGGAATAACCAT 21372 Query 6513 CAAAG 6517 ||||| Sbjct 21373 CAAAG 21377 >seq283 Length=322283 Score = 154 bits (170), Expect = 1e-33 Identities = 263/377 (70%), Gaps = 6/377 (2%) Strand=Plus/Plus Query 6237 AATGATCTCATCATTGGGTTAAAAGGGAAAGAGCGTGAAGTAAAAATTAAGGGACGATT- 6295 || || || || || | || ||||||||||| | ||| | | || | | |||||| Sbjct 271939 AAAGAACTAATAATATGATTGAAAGGGAAAGAAAGAGAAATCAGAAAGACAG-ACGATTT 271997 Query 6296 CTTCTCTTTGATGTCTTGGAGATTGAGGGAATATTTCGTTGTTACAGAATATCTTATAAA 6355 |||||||||| ||||||| ||||||||||||||||| |||| || ||||| || || Sbjct 271998 CTTCTCTTTG---TCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAA 272054 Query 6356 GGAGCATTTCGTCCCATTATTCAATGGGTTGACAATGGCAGATGACATGACGACAGTGAT 6415 | | | | || || | ||| ||| ||| || || |||||||||||| |||| | Sbjct 272055 GATGGAGTATGTTCCTCTCTTCCATGTTTTGCCA-TGAAAGATGACATGACATCAGTTGT 272113 Query 6416 ATCGAAATTGATGGACAGAACCCAAGGTCAGGGCGGAGAGGACTACACACAAATCTGCAT 6475 | |||| |||||||||| ||| ||| || || ||| |||||| || | | || Sbjct 272114 AAAGAAAATGATGGACAGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAAT 272173 Query 6476 CGCCAATCACATTGACTATGAAAAATGGAACAATCATCAAAGAAAGGACGCCACCGGCCC 6535 || || ||||| || || ||||| ||||| || |||||||||| | || | || Sbjct 272174 TGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACC 272233 Query 6536 TGTCTTTAAGGTCATGGGACAGTTCTTGGGATTACCAAATTTAATCTATCGAACACATGA 6595 || || || || ||||| | ||||| ||||| | ||| | |||| | || ||||| Sbjct 272234 AGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGA 272293 Query 6596 GTTCTTTGAACAGAGCT 6612 ||||| |||| |||| Sbjct 272294 ATTCTTCCAACAAAGCT 272310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35445023356912