Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025353.1 Length=11070 Score E Sequences producing significant alignments: (Bits) Value seq1383 140 2e-29 seq283 127 1e-25 >seq1383 Length=104272 Score = 140 bits (154), Expect = 2e-29 Identities = 412/620 (66%), Gaps = 20/620 (3%) Strand=Plus/Plus Query 6231 GAAGATTTGGTCATCGGGCTGAAAGGGAAAGAACGAGAATTAAAATTGGCCGGCAGAttt 6290 ||||| |||| ||||| | | || || ||| ||||| ||||| | | || ||||| Sbjct 8300 GAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTC 8359 Query 6291 ttttCTCTTATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTATTTAAT-AAA 6349 || ||| | ||||| ||| | | |||||||| || ||||| || ||||| | || ||| Sbjct 8360 TTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAA 8419 Query 6350 GACACATTTTGTCCCCATGTTTAAGGGATTGACAATGGCAGATGATCTAACAGCTGTCAT 6409 || | ||| ||| || | || || || || |||||||| || | | || | || || Sbjct 8420 GA-ATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGAT 8478 Query 6410 AAAGAAAATGATGGATACCTCATCAGGACAGGGTTTGGATAATTACGACTCAATTTGCA- 6468 ||||| ||||| |||| ||| |||||||| || | | ||| | ||| | ||| Sbjct 8479 CAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCC-CAAATCGCAA 8537 Query 6469 TAGCCAATCACATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAATCCAATGGTC 6528 | ||||| ||||| |||||||| || |||||||||||||| | | || || | | | Sbjct 8538 TTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCC 8597 Query 6529 CTGTTTTTAGGGTAATGGGACAATTCCTTGG-CTACC-CCAATTTGATTGAACGCACCCA 6586 |||| || | || ||||| |||| |||| |||| || ||| || || || || Sbjct 8598 CTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTT--TTTCTCGTACACA 8655 Query 6587 TGAATTCTTTGAAAAAAGTCTGATTTACTATAATGGACGTCCAGACCTGATG-CGAGTAA 6645 | | || ||| | ||||| | |||| || |||| | | || ||| | ||| ||| | Sbjct 8656 TCAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGA 8715 Query 6646 ACG-GAAACACCTTA---GAAAACAGAACACCTCTCAACGTTTGTTGGCAAGGTCAAGCT 6701 | |||||| || ||| || | | || |||||| | || | |||| Sbjct 8716 TGGAGAAACATTATACTCGAAGGAAGGATA-----TTGGGTCTGTTGGAATGGAC-AGCT 8769 Query 6702 -GGAGGCTTAGAGGGGCTTAGACAAAAAGGATGGAGCATCCTGAATCTTCTTGTGATTCA 6760 ||||| | || || || ||||| | || ||||| || | || || || || | | Sbjct 8770 AGGAGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGA 8829 Query 6761 AAGAGAAGCAAAGATTCGAAATACAGCGGTCAAGGTGCTAGCTCAGGGAGACAATCAGGT 6820 |||||| || || || ||||| || || | ||||| |||||||| ||||| Sbjct 8830 GAGAGAATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGT 8889 Query 6821 CATTTGCACGCAATATAAAA 6840 || || || || ||||||| Sbjct 8890 TATATGTACTCACTATAAAA 8909 Score = 100 bits (110), Expect = 2e-17 Identities = 205/302 (68%), Gaps = 2/302 (1%) Strand=Plus/Plus Query 6208 TAGACAAATATGGCTTAGAACTGGAAGATTTGGTCATCGGGCTGAAAGGGAAAGAACGAG 6267 |||||||| |||| || | |||||| | || ||||| || | || || ||| | Sbjct 21074 TAGACAAAAATGGACTAACCCAGGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGG 21133 Query 6268 AATTAAAATTGGCCGGCAGAtttttttCTCTTATGTCCTGGAAGTTGAGAGAATATTTCG 6327 || | ||| | | || ||||||| || |||||||| ||| | | | | || || | Sbjct 21134 AAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTG 21193 Query 6328 TCATTACGGAGTATTTAAT-AAAGACACATTTTGTCCCCATGTTTAAGGGATTGACAATG 6386 | || ||||| ||| |||| ||||| | | | ||| || ||||||| || || || ||| Sbjct 21194 TGATCACGGAATATCTAATCAAAGA-ATACTATGTACCGCTGTTTAAAGGGTTAACTATG 21252 Query 6387 GCAGATGATCTAACAGCTGTCATAAAGAAAATGATGGATACCTCATCAGGACAGGGTTTG 6446 ||||| || | || | || |||||||||||||| || | || || ||| || | Sbjct 21253 GCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCTAGAACAAGGACTC 21312 Query 6447 GATAATTACGACTCAATTTGCATAGCCAATCACATTGATTATGAGAAGTGGAACAATCAC 6506 | | ||| | || || || ||||||||||| |||||||| ||||| || || Sbjct 21313 ACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAAATGGAATAACCAT 21372 Query 6507 CA 6508 || Sbjct 21373 CA 21374 Score = 80.6 bits (88), Expect = 2e-11 Identities = 146/214 (68%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 6928 AAGGAACTGAAAAATTAGGTTTACTGATAAATGATGATGAGACAATGCAGTCCGCTGATT 6987 ||||||| | ||| | ||| || | || ||||| |||||| || || || || |||| Sbjct 29213 AAGGAACAAAGAAACTTGGTCTAATAATCAATGAGAGTGAGACGATCCAATCAGCAGATT 29272 Query 6988 ACCTCAACTACGGGAAAATTCCAATATTCCGTGGTGTTATACGAGGGTTAGAGACAAAAA 7047 || | ||||| |||||| |||| |||| | || || | |||| || || | Sbjct 29273 ACATGAACTATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTCCCATTAGTCACCAAGA 29332 Query 7048 GATGGTCTCGAGTCACATGTGTTACGAACGATCAAATCCCAACTTGTGCCAACATCATGA 7107 || |||| || | || ||||| || || |||||||||||| | | ||| || || | Sbjct 29333 GAGTGTCTAGAATGACCTGTGTAACAAATGATCAAATCCCATCCTTTGCAAATGTCCTCT 29392 Query 7108 GTTCAGTTTCCACTAATGCATTAACAGTCGCACA 7141 | |||| || || || || || ||| | ||||| Sbjct 29393 CTGCAGTGTCAACCAACGCTTTGACATTGGCACA 29426 >seq283 Length=322283 Score = 127 bits (140), Expect = 1e-25 Identities = 248/358 (69%), Gaps = 10/358 (3%) Strand=Plus/Plus Query 6250 TGAAAGGGAAAGAACGAGAATTAAAATTGGCCGGCAGAtttttttCTCTTATGTCCTGGA 6309 |||||||||||||| ||||| | | | | | | | ||||| || ||||| |||| |||| Sbjct 271958 TGAAAGGGAAAGAAAGAGAAATCAGAAAGACAGAC-GATTTCTT-CTCTT-TGTCTTGGA 272014 Query 6310 AGTTGAGAGAATATTTCGTCATTACGGAGTATTTAATAAAGACACATTTTGTCCCCATGT 6369 ||||| ||||||||||| ||||| |||||| | || |||| | | ||| || | | Sbjct 272015 CCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCCTCTCT 272074 Query 6370 TTAAGGGATTGACAATGGCAGATGATCTAACAGCTGTCATAAAGAAAATGATGGA---TA 6426 | | | ||| || || |||||| | ||| | || |||||||||||||||| || Sbjct 272075 TCCATGTTTTGCCA-TGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGACAGTA 272133 Query 6427 CCTCATCAGGACAGGGTTTGGATAATTACGACTCAATTTGCATAGCCAATCACATTGATT 6486 | ||| |||||| || | ||||| ||| | || | || || || ||||| |||| Sbjct 272134 C--CAT-AGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGATT 272190 Query 6487 ATGAGAAGTGGAACAATCACCAGCGGAAAGAATCCAATGGTCCTGTTTTTAGGGTAATGG 6546 | || || ||||| || || || | | || | ||| || || || | ||||||| Sbjct 272191 ACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAATGG 272250 Query 6547 GACAATTCCTTGGCTACCCCAATTTGATTGAACGCACCCATGAATTCTTTGAAAAAAG 6604 | ||||| |||| | | ||| || | | | |||||||||||||| || |||| Sbjct 272251 GTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTTCCAACAAAG 272308 Score = 84.2 bits (92), Expect = 2e-12 Identities = 192/285 (67%), Gaps = 7/285 (2%) Strand=Plus/Plus Query 6359 TGTCCCCATGTTTAAGGGATTGACAATGGCAGATGATCTAACAGCTGTCATAAAGAAAAT 6418 |||||| | || | || ||||| ||||||||||| | ||| | || |||||||||| Sbjct 273423 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAAAT 273482 Query 6419 GATGG---ATACCTCATCAGGACAGGGTTTGGATAATTACGACTCAATTTGCATAGCCAA 6475 ||||| ||| ||| |||||| || | | ||| ||||| || | || || || Sbjct 273483 GATGGGCAGTAC--CAT-AGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAA 273539 Query 6476 TCACATTGATTATGAGAAGTGGA-ACAATCACCAGCGGAAAGAATCCAATGGTCCTGTTT 6534 ||||| ||||| || || | || | |||| ||| ||| ||||| |||| || || | Sbjct 273540 CCACATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGT 273599 Query 6535 TTAGGGTAATGGGACAATTCCTTGGCTACCCCAATTTGATTGAACGCACCCATGAATTCT 6594 | | |||||||| |||| | || | | || || | | ||| ||||||||| Sbjct 273600 TCAAAGTAATGGGTCAATCCTTTAGATTGGTTAACCTGTTCTGCCAGACCAATGAATTCT 273659 Query 6595 TTGAAAAAAGTCTGATTTACTATAATGGACGTCCAGACCTGATGC 6639 | || |||| | || ||||| || | | ||||||| |||| Sbjct 273660 TCCAACAAAGCTTTATATACTACAAAGAGAGGACAGACCTAATGC 273704 Score = 82.4 bits (90), Expect = 5e-12 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 6359 TGTCCCCATGTTTAAGGGATTGACAATGGCAGATGATCTAACAGCTGTCATAAAGAAAAT 6418 |||||| | || | || ||||| ||||||||||| | | | | || |||| ||||| Sbjct 292276 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAA-AAAAT 292334 Query 6419 GATGGATACCTCATCAGGACAGGGTTTGGATAATTACGACTCAATTTGCATAGCCAATCA 6478 ||||| | | ||||||| || | | ||| ||||| || | || || || || Sbjct 292335 GATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAACCA 292394 Query 6479 CATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAATCCAATGGTCCTGTTTTTAG 6538 ||| ||||| || || |||||||||| ||| ||| |||| |||| || || || | Sbjct 292395 CATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTCAA 292454 Query 6539 GGTAATGGGACAATTCCTT 6557 |||||||| ||| ||||| Sbjct 292455 AGTAATGGGTCAA-TCCTT 292472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35285130613512