Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025356.1 Length=11097 Score E Sequences producing significant alignments: (Bits) Value seq1383 241 9e-60 seq283 127 1e-25 >seq1383 Length=104272 Score = 241 bits (266), Expect = 9e-60 Identities = 612/910 (67%), Gaps = 36/910 (4%) Strand=Plus/Plus Query 6302 TAATAGGACTAAAAGGGAAAGAAAGAGAATTGAAAATCGCCGGAAGATTCTTTTCCCTGA 6361 |||| ||| ||| || || ||||||||| | |||||| | ||||||||||| || ||| Sbjct 8310 TAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGA 8369 Query 6362 TGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTACTTAAT-AAAGACTCATTAT 6420 |||| ||| |||| |||||||| ||||||||||| |||||| | || ||||| | ||||| Sbjct 8370 TGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAAT-ATTAT 8428 Query 6421 GTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACATCAGTTGTAAAGAAGATG 6480 |||||| | |||||||| | ||||||||||| | |||| | || | ||||||||| Sbjct 8429 GTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATG 8488 Query 6481 TTGGACAACACGAATGGACAAGGACTGGATGATTATTCATCGATTTGC-ATCGCCAATCA 6539 | || | | | ||||| ||| | ||| || || | | | || || ||||| || Sbjct 8489 ATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTC-CCAAATCGCAATTGCCAACCA 8547 Query 6540 CATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAATCCAATGGGCCTGTGTTTCG 6599 |||||| ||||| || ||||| ||||| || ||| | || || | | ||||| || Sbjct 8548 CATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCAC 8607 Query 6600 AGTCATGGGGCAGTTTTTGGGTTATCCCAG-ATTGTTTGAAAGAACCCATGAGTTTTTTG 6658 || |||||| | ||||| || | | |||| | | ||| | || ||| |||||||| Sbjct 8608 TGTGATGGGGAAATTTTTTGGAT-TACCAGCACTTTTTTCTCGTACACATCAGTTTTTTA 8666 Query 6659 AATCAAGCCTCATTTACTACAACGGCAGACCAGACTTGATGGATGTAAGA-GGAGATTCG 6717 | ||| | |||| ||||| | ||||| ||||| || ||| || ||||| | Sbjct 8667 AGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAAT-GATCAGTGATGGAGAAACA 8725 Query 6718 TTGATCAATACCACTGA---AAAGTTGGTGTGTTGGGAGGGTCAGGCGGGAGGATTGGAA 6774 || || | | | || | | | ||| |||||| | || ||| ||||| | ||| Sbjct 8726 TT-AT--ACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAA 8782 Query 6775 GGATTGAGACAAAAAGGATGGAGTGTGCTGAATCTGTTAGTCATAAACAGGGAATCATCC 6834 ||| | ||||| | || |||||| | | || || |||| || | || |||| Sbjct 8783 GGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAA 8842 Query 6835 ATAAGAAATACAATCGTGAAAGTACTAGCGCAGGGAGACAATCAGGTCATCTGTACTCAA 6894 ||| | ||||| ||||| | | || || |||||||| ||||| || |||||||| Sbjct 8843 ATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCAC 8902 Query 6895 TATAAAA--CAAAAAATTACAAGAACGAGGAAGAGCTTAAAATG---CTTTTATCTGCCA 6949 ||||||| | || ||| || | | ||||| |||| | || || | Sbjct 8903 TATAAAATCCCAACCGTTAGAACACC--TGAAGA---AAAAAAGCCCCTCATACAAGGAG 8957 Query 6950 TGGTAGATAACAATCAGACAATCATGAAT--AGTATCGTGACAGGGACAGGTAAGTTGGG 7007 | | | |||| | | ||||||||| |||| || || ||| ||||| || Sbjct 8958 CGATTCAGAACACAAATGCCATCATGAATGCAGTA--GTCGATGGAACAAAGAAGTTAGG 9015 Query 7008 ATTGATCATAAATAATGATGAGACCATGCAATCTGCAGATTACCTTAATTACGGAAAAAT 7067 ||| ||||| ||||| ||| ||||| ||||| |||||||| | ||||| || ||| | Sbjct 9016 ATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGCAAAGT 9075 Query 7068 GCCAGTCTTCCGAGGA---ATCCT-AAGAGGATTAGAGACTAAAAGATGGTCCAGGGTCA 7123 || |||||| |||| ||| | | |||| |||||| | ||| || | | Sbjct 9076 ACCGATCTTCCAAGGAAATATCTTGCCGTTGATT----ACTAAACGTGTGTCAAGAATGA 9131 Query 7124 CATGCATCACGAATGATCAGATTCCAACATTGGCAGGAGTAATGTCTTCTGTGTCAACAA 7183 | || | || ||||||||||| | |||| | | ||| | || | || || |||| Sbjct 9132 CCTGTGTGACCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATCTACAA 9191 Query 7184 ATGCACTGAC 7193 ||||| |||| Sbjct 9192 ATGCATTGAC 9201 Score = 136 bits (150), Expect = 3e-28 Identities = 195/272 (72%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 6302 TAATAGGACTAAAAGGGAAAGAAAGAGAATTGAAAATCGCCGGAAGATTCTTTTCCCTGA 6361 |||| ||||||| || || |||| ||| | ||||| | ||| |||| || || || | Sbjct 21107 TAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTA 21166 Query 6362 TGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTACTTAAT-AAAGACTCATTAT 6420 |||| ||| |||| | | || ||||| ||||| || || |||| ||||| | | ||| Sbjct 21167 TGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAAT-ACTAT 21225 Query 6421 GTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACATCAGTTGTAAAGAAGATG 6480 ||||| | || ||||| | || ||||| || || |||| ||||| ||||||| ||| Sbjct 21226 GTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATG 21285 Query 6481 TTGGACAACACGAATGGACAAGGACTGGATGATTATTCATCGATTTGCATCGCCAATCAC 6540 | |||| | | ||||||||| ||| || || ||| ||||| |||||| Sbjct 21286 ATAGACAGTTCTCTAGAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCAC 21345 Query 6541 ATCGACTATGAGAAGTGGAATAATCATCAGAG 6572 || ||||||||||| |||||||| ||||| || Sbjct 21346 ATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 104 bits (114), Expect = 2e-18 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 6325 AGAGAATTGAAAATCGCCGGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATAT 6384 |||||| | ||||| | ||| |||| || || || | ||| ||| |||| | || || Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6385 TTTGTCATCACCGAGTACTTAAT-AAAGACTCATTATGTACCATTATTCAAAGGACTCAC 6443 ||||| ||||| || || |||| ||||| | | |||||||| | || ||||| | || Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAAT-ACTATGTACCGCTGTTTAAAGGGTTAAC 38031 Query 6444 AATGGCGGATGATCTGACATCAGTTGTAAAGAAGATGTTGGACAACACGAATGGACAAGG 6503 ||||| || || |||| | || | ||||| ||| | |||| | |||||| | Sbjct 38032 TATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATG 38091 Query 6504 ACTGGATGATTATTCATCGATTTGCATCGCCAATCACATCGACTATGAGAAGTGGAATAA 6563 || || |||||| || ||||| || || |||||||||||||||||||| || Sbjct 38092 CCTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAA 38151 Query 6564 TCATCAGAG 6572 ||||| || Sbjct 38152 CCATCAAAG 38160 >seq283 Length=322283 Score = 127 bits (140), Expect = 1e-25 Identities = 200/279 (72%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 6298 CTCATAATAGGACTAAAAGGGAAAGAAAGAGAATTGAAAATCGCCGGAAGATTCTTTTCC 6357 || |||||| || | |||||||||||||||||| | | || | | || |||| | ||| Sbjct 271945 CTAATAATATGATTGAAAGGGAAAGAAAGAGAAATCAGAAA-GACAGACGATT-TCTTCT 272002 Query 6358 CTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTACTTAATAAAGACTCAT 6417 || |||| ||| |||| |||||||| || || |||||||| | || |||| | Sbjct 272003 CTT-TGTCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAG 272061 Query 6418 TATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACATCAGTTGTAAAGAAG 6477 ||||| || | ||| | | | || || ||||| ||||||||||||||||||| Sbjct 272062 TATGTTCCTCTCTTCCATGTTTTGCCA-TGAAAGATGACATGACATCAGTTGTAAAGAAA 272120 Query 6478 ATGTTGGACAACACGAATGGACAAGGACTGGATGATT--ATTCATCGATTTGCATCGCCA 6535 ||| |||||| || | ||||||||||| ||| | | | ||| || | || || | Sbjct 272121 ATGATGGACAGTACCATAGGACAAGGACTAGATAACTACAAGCAT--GTTGGAATTGCTA 272178 Query 6536 ATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAA 6574 | |||||||| || || || |||||||| ||||| |||| Sbjct 272179 ACCACATCGATTACGAAAATTGGAATAAACATCAAAGAA 272217 Score = 91.5 bits (100), Expect = 1e-14 Identities = 197/289 (68%), Gaps = 13/289 (4%) Strand=Plus/Plus Query 6418 TATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACATCAGTTGTAAAGAAG 6477 ||||| || | ||| | || | || ||||| ||||| ||||||||||||||||||| Sbjct 273421 TATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAA 273480 Query 6478 ATGTTGGACAACACGAATGGACAAGGACTGGATGATTATTCATCGATTTGCATCGCCAAT 6537 ||| ||| || || | ||||||||||| | | | || | || | || || || Sbjct 273481 ATGATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAAC 273540 Query 6538 CACATCGACTATGAGAAGTGGA-ATAATCATCAGAGAAAAGAATCCAATGGGCCTGTGTT 6596 |||||||| || || || | || | |||| ||||| | ||||| |||| || ||||| Sbjct 273541 CACATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTT 273600 Query 6597 TCGAGTCATGGGGCAGT--TTT---TGGGTTATCCCAGATTGTT-TGAAAGAACCCATGA 6650 ||| ||||| || | ||| | ||||| || |||| || || ||| |||| Sbjct 273601 CAAAGTAATGGGTCAATCCTTTAGATTGGTTAACC-----TGTTCTGCCAG-ACCAATGA 273654 Query 6651 GTTTTTTGAATCAAGCCTCATTTACTACAACGGCAGACCAGACTTGATG 6699 || || || |||| | || |||||||| | || ||||| | ||| Sbjct 273655 ATTCTTCCAACAAAGCTTTATATACTACAAAGAGAGGACAGACCTAATG 273703 Score = 78.8 bits (86), Expect = 7e-11 Identities = 137/196 (70%), Gaps = 5/196 (3%) Strand=Plus/Plus Query 6418 TATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACATCAGTTGTAAAGAAG 6477 ||||| || | ||| | || | || ||||| ||||| ||| |||||||||||| || Sbjct 292274 TATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAA-AAA 292332 Query 6478 ATGTTGGACAACACGAATGGACAAGGACTGGATGATTA--TTCATCGATTTGCATCGCCA 6535 ||| ||| || || | ||||||||||| | | | || ||| || | || || | Sbjct 292333 ATGATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCAT--GTTGGAATTGCTA 292390 Query 6536 ATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAATCCAATGGGCCTGTGT 6595 | |||||||| || || || ||||| |||| ||||| | |||| |||| || |||| Sbjct 292391 ACCACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGT 292450 Query 6596 TTCGAGTCATGGGGCA 6611 | ||| ||||| || Sbjct 292451 TCAAAGTAATGGGTCA 292466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35371472694948