Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19]
59,587 sequences; 511,738,253 total letters
Query= NC_025358.1
Length=15024
Score E
Sequences producing significant alignments: (Bits) Value
seq1383 178 1e-40
seq283 104 2e-18
>seq1383
Length=104272
Score = 178 bits (196), Expect = 1e-40
Identities = 315/454 (69%), Gaps = 4/454 (1%)
Strand=Plus/Plus
Query 10098 CCTGAATTTCTTAAAGCAATTAATGATCACGGACTAGATTGGGAAAAATTGGTGATTGGG 10157
|||| |||||| || || | ||| | ||| | | | | ||| | |||| || ||
Sbjct 8258 CCTGTATTTCTCAAGAAGATCAGTGAGGAAGGATTGGGTAGAGAAGAGCTGGTAATCGGA 8317
Query 10158 TTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCTTTAATGTCTTAC 10217
|| | ||| |||||| ||||| | ||| || |||||||| ||||| ||||| |
Sbjct 8318 TTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGG 8377
Query 10218 GAATTGAGGGATTATTTTGT-ATCTACTGAATACCTGATCAAGAAATATTTTGTACCCTT 10276
||| | || || || ||||| ||| || || ||||||||||| |||||| |||||| |
Sbjct 8378 GAACTCAGAGAATACTTTGTCATC-ACAGAGTACCTGATCAAAGAATATTATGTACCACT 8436
Query 10277 ATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAGATGTTGGATGT 10336
|| |||| |||||||||| || | ||| || || || ||||||||| | |||
Sbjct 8437 TTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAG 8496
Query 10337 CTCAAGCGGCCAGGGAACCAGAGAATATGATTATATAACTATTGCAAACAACATCGATTA 10396
||| || |||||| | || || | || | ||||| ||| ||||||||||
Sbjct 8497 CTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTA 8556
Query 10397 TGAAAAATGGAATAATTATCAAAGGATA-GAGTCTAACGGTCCAGTATTTACTGTCATGG 10455
|||||||||||| ||| | |||| |||| || || | | || ||||| ||||| ||||
Sbjct 8557 TGAAAAATGGAACAATCACCAAA-GATATGACTCAACAGCCCCTGTATTCACTGTGATGG 8615
Query 10456 GAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTTCCAAAAAAGCT 10515
| |||||||| || |||| || ||| | | || ||| | || || | |||| |
Sbjct 8616 GGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTAAGGAAAGTT 8675
Query 10516 TGATTTATTATAACCAAAGGCCTGATTTAATGAT 10549
| ||||||| || |||| || || ||||||||
Sbjct 8676 TAGTTTATTACAATGAAAGACCCGACTTAATGAT 8709
Score = 82.4 bits (90), Expect = 7e-12
Identities = 192/285 (67%), Gaps = 6/285 (2%)
Strand=Plus/Plus
Query 10139 GGAAAAATTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATT 10198
|||| || | || || || | | ||| |||||| ||| | ||| | || ||||
Sbjct 21096 GGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATT 21155
Query 10199 CTTTTCTTTAATGTCTTACGAATTGAGGGATTATTTTGT-ATCTACTGAATACCTGATCA 10257
|| || | ||||||| ||| | | | || ||||| ||| || ||||| || ||||
Sbjct 21156 TTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATC-ACGGAATATCTAATCA 21214
Query 10258 AGAAATATTTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAA 10317
| |||| | |||||| | ||| |||| |||| ||||| || || ||| |||||| |
Sbjct 21215 AAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTA 21274
Query 10318 TTAAGAAGATGTTGGATG--TCTCAAGCGGCCAGGGAACCAGAGAATATGATTATATAAC 10375
| ||||| ||| | || |||| || || ||| || || || | || ||
Sbjct 21275 TAAAGAAAATGATAGACAGTTCTCTAGAA--CAAGGACTCACTGACTACTCCCAGATCAC 21332
Query 10376 TATTGCAAACAACATCGATTATGAAAAATGGAATAATTATCAAAG 10420
|| ||||| |||| || ||||| ||||||||||| |||||||
Sbjct 21333 AATCGCAAATCACATTGACTATGAGAAATGGAATAACCATCAAAG 21377
>seq283
Length=322283
Score = 104 bits (114), Expect = 2e-18
Identities = 111/144 (77%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 10377 ATTGCAAACAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGGT 10436
||||| ||| |||||||||| ||||| |||||||| ||||||| || | ||||
Sbjct 272172 ATTGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAA 272231
Query 10437 CCAGTATTTACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTT-TACAAGAACTCA 10495
||||| || | ||| ||||| ||||| || || | ||||||| || ||| ||| | ||
Sbjct 272232 CCAGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACC-CA 272290
Query 10496 TGAATTCTTCCAAAAAAGCTTGAT 10519
||||||||||||| ||||||| ||
Sbjct 272291 TGAATTCTTCCAACAAAGCTTTAT 272314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 47925357876347
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |