Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025362.1 Length=12240 Score E Sequences producing significant alignments: (Bits) Value seq1383 104 2e-18 >seq1383 Length=104272 Score = 104 bits (114), Expect = 2e-18 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 7461 AGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATGTCTTGGGAACTGAGGGAGTAT 7520 |||||| | ||| | ||| ||||||| || |||| |||||||||||| | ||||| Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 7521 TTTGT-ATCTACTGAATACTTGATTAAGAAGCATTTTGTACCATTGTTTAAAGGCTTGAC 7579 ||||| ||| || ||||| | || || | | | |||||| |||||||||| || || Sbjct 37973 TTTGTGATC-ACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAAC 38031 Query 7580 TATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTGGAGTCATCAATGGGACAGGG 7639 |||||| || ||| || || | ||||||||| | || ||| ||||||| | Sbjct 38032 TATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATG 38091 Query 7640 GAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTCGATTATGAGAAGTGGAACAA 7699 | || ||| | | || || |||||| |||| ||||||||||||||||| Sbjct 38092 CCTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAA 38151 Query 7700 CCACCAAAG 7708 ||| ||||| Sbjct 38152 CCATCAAAG 38160 Score = 82.4 bits (90), Expect = 6e-12 Identities = 120/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 7451 AGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATGTCTTGGGAACT 7510 |||||| |||| ||| | ||| | ||| ||||||| || ||||||||||||||||| Sbjct 21120 AGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACT 21179 Query 7511 GAGGGAGTATTTTGT-ATCTACTGAATACTTGATTAAGAAGCATTTTGTACCATTGTTTA 7569 | |||| ||||| ||| || ||||| | || || | | | |||||| |||||| Sbjct 21180 ACGTAAGTACTTTGTGATC-ACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTA 21238 Query 7570 AAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATG 7616 |||| || |||||||| || ||| || || | ||||||||| Sbjct 21239 AAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATG 21285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39026620809072