Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025376.1 Length=11096 Score E Sequences producing significant alignments: (Bits) Value seq1383 201 8e-48 seq283 118 7e-23 >seq1383 Length=104272 Score = 201 bits (222), Expect = 8e-48 Identities = 409/600 (68%), Gaps = 8/600 (1%) Strand=Plus/Plus Query 6303 ATAGGGTTAAAAGGAAAGGAGAGAGAATTGAAAATTGCCGGAAGATTTTTCTCCCTAATG 6362 || || |||| || ||||| |||||| | ||||| | |||||||| ||||| | ||| Sbjct 8312 ATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATG 8371 Query 6363 TCATGGCAGTTAAGGGAGTACTTCGTCATCACAGAGTACTTGATCAAAACACACTATGTC 6422 || ||| | | || || ||||| ||||||||||||||| |||||||| | | ||||| Sbjct 8372 TCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTA 8431 Query 6423 CCGTTGTTCAAGGGACTGACGATGGCAGATGACCTTACATCCGTTGTGAAGAAGATGTTG 6482 || | ||||| || | || ||||| || || | || |||| | ||||||||| | Sbjct 8432 CCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATA 8491 Query 6483 GACAACACAAATGGACAAGGATTGGATGACTACTCCTCTATCTGTATTGCCAACCACATT 6542 || | | | ||||| ||||| |||||||||| ||| |||||||||||||| Sbjct 8492 GATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATC 8551 Query 6543 GACTACGAAAAATGGAATAATCATCAGAGGAAAGAGTCTAATGGTCCAGTGTTTCGAGTA 6602 || || ||||||||||| ||||| || || | || || | | || || || || Sbjct 8552 GATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTG 8611 Query 6603 ATGGGACAGTTTCTAGGGTATCCTAGACTGTTTGAAAGGACACATGAGTTCTTTGAGTCC 6662 ||||| | ||| | || | || ||| ||| | |||||| |||| ||| || Sbjct 8612 ATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTAAGGAA 8671 Query 6663 AGCCTCATCTACTACAATGGAAGACCAGACCTGATGGATGTGAGAGGG-GATTCATTGAT 6721 || | | || ||||||| |||||| ||| | ||| || | || || || |||| || Sbjct 8672 AGTTTAGTTTATTACAATGAAAGACCCGACTTAATG-ATCAGTGATGGAGAAACATT-AT 8729 Query 6722 CAACACTACAGAC--AAATTAG-TGTGTTGGGAGGGACAAGCAGGAGGTCTGGAAGGATT 6778 || | | || | ||| | | |||||| | ||||| |||||| || |||||| | Sbjct 8730 --ACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACT 8787 Query 6779 GCGACAAAAAGGATGGAGCGTTTTGAACCTACTAGTCATAAACAGAGAGTCTTCCATCCG 6838 |||| | || ||||| | || ||||| ||||| || | ||||| | | || || Sbjct 8788 CAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACG 8847 Query 6839 AAATACTGTGGTAAAGGTTCTTGCCCAAGGAGACAATCAGGTGATCTGCACTCAATACAA 6898 ||||| || || | || ||||||||||| ||||| || || ||||| || || Sbjct 8848 TAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACTATAA 8907 Score = 131 bits (144), Expect = 1e-26 Identities = 186/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 6310 TAAAAGGAAAGGAGAGAGAATTGAAAATTGCCGGAAGATTTTTCTCCCTAATGTCATGGC 6369 ||| || |||||| | ||| | ||||| | ||| |||||||||| || ||||| ||| Sbjct 21116 TAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGG 21175 Query 6370 AGTTAAGGGAGTACTTCGTCATCACAGAGTACTTGATCAAAACACACTATGTCCCGTTGT 6429 | || | ||||||| || ||||| || || | |||||| | ||||||| ||| ||| Sbjct 21176 AACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGT 21235 Query 6430 TCAAGGGACTGACGATGGCAGATGACCTTACATCCGTTGTGAAGAAGATGTTGGACAACA 6489 | || || | || |||||||| | | || | ||| | ||||| ||| | |||| Sbjct 21236 TTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTT 21295 Query 6490 CAAATGGACAAGGATTGGATGACTACTCCTCTATCTGTATTGCCAACCACATTGACTACG 6549 | | ||||||| | |||||||||| ||| || || || ||||||||||| | Sbjct 21296 CTCTAGAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATG 21355 Query 6550 AAAAATGGAATAATCATCAGAG 6571 | ||||||||||| ||||| || Sbjct 21356 AGAAATGGAATAACCATCAAAG 21377 >seq283 Length=322283 Score = 118 bits (130), Expect = 7e-23 Identities = 144/195 (74%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 6417 TATGTCCCGTTGTTCAAGGGACTGACGATGGCAGATGACCTTACATCCGTTGTGAAGAAG 6476 |||||||| | ||| | || |||| |||||||||||| | ||||| ||||| ||||| Sbjct 273421 TATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAA 273480 Query 6477 ATGTTGGACAACACAAATGGACAAGGATTGGATGACTACTCCTCTATCTGTATTGCCAAC 6536 ||| ||| || || | ||||||||| | | | ||||| | | ||||| ||| Sbjct 273481 ATGATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAAC 273540 Query 6537 CACATTGACTACGAAAAATGGA-ATAATCATCAGAGGAAAGAGTCTAATGGTCCAGTGTT 6595 ||||| || |||||||||| || | |||| ||||||| || ||||||| |||||||| Sbjct 273541 CACATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTT 273600 Query 6596 TCGAGTAATGGGACA 6610 ||||||||| || Sbjct 273601 CAAAGTAATGGGTCA 273615 Score = 116 bits (128), Expect = 3e-22 Identities = 143/194 (74%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 6417 TATGTCCCGTTGTTCAAGGGACTGACGATGGCAGATGACCTTACATCCGTTGTGAAGAAG 6476 |||||||| | ||| | || |||| |||||||||||| | | ||| ||||| || || Sbjct 292274 TATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAAAAA- 292332 Query 6477 ATGTTGGACAACACAAATGGACAAGGATTGGATGACTACTCCTCTATCTGTATTGCCAAC 6536 ||| ||| || || | ||||||||| | | | ||||| | | | ||||| ||| Sbjct 292333 ATGATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAAC 292392 Query 6537 CACATTGACTACGAAAAATGGAATAATCATCAGAGGAAAGAGTCTAATGGTCCAGTGTTT 6596 ||||| || |||||||||||||| |||| ||||||| | ||||||| |||||||| Sbjct 292393 CACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTC 292452 Query 6597 CGAGTAATGGGACA 6610 ||||||||| || Sbjct 292453 AAAGTAATGGGTCA 292466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35368274840080