Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025378.1 Length=11202 Score E Sequences producing significant alignments: (Bits) Value seq1383 215 4e-52 seq283 134 1e-27 >seq1383 Length=104272 Score = 215 bits (238), Expect = 4e-52 Identities = 606/912 (66%), Gaps = 20/912 (2%) Strand=Plus/Plus Query 6326 GACGACCTTGTGATTGGACTTAAAGGGAAAGAGAGAGAATTAAAATTGATTGGGCGTTTC 6385 || || || || || ||| | | || || || |||||| ||||| | || | ||| Sbjct 8300 GAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTC 8359 Query 6386 TTTTCTCTCATGTCTTGGAAATTGAGAGAATACTTCGTCATAACCGAGCACCTAAT-TAA 6444 || ||| | ||||| ||| || | ||||||||||| ||||| || ||| |||| || || Sbjct 8360 TTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAA 8419 Query 6445 GACTCACTTTGTCCCTCTGTTCCACGGACTTACGATGGCAGATGATCTCACATCAGTGAT 6504 || | | | ||| || || ||| | || | || ||||| || | | || | ||||| Sbjct 8420 GAAT-ATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGAT 8478 Query 6505 CAAGAAGATGATGGACAGTTCCTCGGGGCAGGGGTTGACAGATTACTCAGCTGTAT-GC- 6562 |||||||||||| || || ||| ||| ||||| || || || ||||| | || || Sbjct 8479 CAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTC--CCAAATCGCA 8536 Query 6563 ATAGCCAATCATATCGACTACGAAAAATGGAACAATCACCAGCGGAAAGAATCCAATGGG 6622 || ||||| || ||||| || |||||||||||||||||||| | | || || | | Sbjct 8537 ATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCC 8596 Query 6623 CCGGTATTCCGAGTAATGGGCCAATTCTTGGGCTTCCCCAATCTGATATCCAGAACGCAC 6682 || |||||| || ||||| |||| || || || || || | || | || || Sbjct 8597 CCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACAT 8656 Query 6683 GAATTCTTTGAGAAAAGTTTGGTTTATTACAATGGCCGGCCAGATTTGATGA-GAGTATC 6741 | || ||| || ||||||| ||||||||||||| | || || || |||| ||| Sbjct 8657 CAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGAT 8716 Query 6742 GGGGAATTCTTTGACAAACACGACCAACCTGAGGGTTTGCTGGGAGGGCCAAGCCGGCGG 6801 || ||| || || | || | | |||| || ||| | || || || || Sbjct 8717 GGAGAAACATTATACTCGAAGGAAGGATAT-TGGGTCTGTTGGAATGGACAGCTAGGAGG 8775 Query 6802 TCTGGAAGGTTTGCGGCAGAAGGGATGGAGCATTTTGAACCTACTGGTGATTCAAAGAGA 6861 || ||||| | | ||| | || ||||| || || ||||| || || | | ||||| Sbjct 8776 GCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGA 8835 Query 6862 AGCCAAAATCCGGAACACCTCAGTGAAAGTTCTAGCACAGGGAGACAATCAGGTGATCTG 6921 | ||||| || || ||| |||||| | || || |||||||| ||||| || || Sbjct 8836 ATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATG 8895 Query 6922 TACCCAGTACAAAACCAGAAACCACAGGGACTCCATCGAGCTCCATAGCGCTT--TGC-A 6978 ||| || || |||| | |||| | || || | || | ||| | | | | | Sbjct 8896 TACTCACTATAAAATC-CCAACCGTTAGAACACC-TGAAGAAAAAAAGCCCCTCATACAA 8953 Query 6979 GGA--CATCCAAAGTAATAACGACGCCATCATGTCTGCCATAGAACGTGGTACCACTAAG 7036 ||| || || || | | ||||||||| ||| ||| ||| || | ||| Sbjct 8954 GGAGCGATTCA---GAACACAAATGCCATCATGAATGCAGTAGTCGATGGAACAAAGAAG 9010 Query 7037 TTAGGACTTGTGATCAACCAAGATGAGACCATGCAATCCGCCGATTATTTGAATTATGGG 7096 |||||| | | ||||| || ||| ||||| ||||| || |||||| |||||||||| Sbjct 9011 TTAGGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGC 9070 Query 7097 AAGATTCCGATTTTCCGTGGAACAATTCGTGGACTCGAATTCAAAAGATG-GTCTAGAGT 7155 || | ||||| |||| |||| | || || | || | | ||| || ||| ||| | Sbjct 9071 AAAGTACCGATCTTCCAAGGAA-ATATCTTGCCGTTGATTACTAAACGTGTGTCAAGAAT 9129 Query 7156 GACATGTGTGACCAATGATCAGCTGCCTACGTGTGCCAACCTCATGTCGTCAGTGTCCAC 7215 ||| |||||||||||||||||| | | | | | || || | | || |||| || || Sbjct 9130 GACCTGTGTGACCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATCTAC 9189 Query 7216 CAATGCTTTGAC 7227 ||||| ||||| Sbjct 9190 AAATGCATTGAC 9201 >seq283 Length=322283 Score = 134 bits (148), Expect = 1e-27 Identities = 243/348 (70%), Gaps = 12/348 (3%) Strand=Plus/Plus Query 6347 AAAGGGAAAGAGAGAGAATTAAAATTGATTGGGCGTTTCTTTTCTCTCATGTCTTGGAAA 6406 ||||||||||| |||||| | | | || | |||||| ||| | |||||||| Sbjct 271960 AAAGGGAAAGAAAGAGAAATCAGAAAGACAGACGATTTCTTCTCTTT---GTCTTGGACC 272016 Query 6407 TTGAGAGAATACTTCGTCATAACCGAGCACCTAATTAAGACTCACTTTGTCCCTCTGTTC 6466 ||||| ||||| ||||| || |||||| | || ||||||| | | ||| ||||| ||| Sbjct 272017 TTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCCTCTCTTC 272076 Query 6467 CACGGACTTACGATGGCAGATGATCTCACATCAGTGATCAAGAAGATGATGGACAGTTCC 6526 || | || | ||| |||||| | |||||||| | ||||| |||||||||||| || Sbjct 272077 CATGTT-TTGCCATGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGACAGTACC 272135 Query 6527 TCGGGGCAGGGGTTGACAGATTACT--CAGC-TGTATGCATAGCCAATCATATCGACTAC 6583 || || || | |||| ||| ||| ||| | || || || || ||||| ||| Sbjct 272136 ATAGGACAAGGACT---AGATAACTACAAGCATGTTGGAATTGCTAACCACATCGATTAC 272192 Query 6584 GAAAAATGGAACAATCACCAGCGGAAAGAATCCAATGGGCCGGTATTCCGAGTAATGGGC 6643 ||||| ||||| || || || | | || | ||| || || ||| |||||||| Sbjct 272193 GAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAATGGGT 272252 Query 6644 CAATTCTTGGGCTTCCCCAATCTGATAT-CCAGAACGCACGAATTCTT 6690 ||||||| || || | |||||| | | |||| || || |||||||| Sbjct 272253 AAATTCTTTGGATTGGCTAATCTGTTCTACCAG-ACCCATGAATTCTT 272299 Score = 104 bits (114), Expect = 2e-18 Identities = 146/201 (73%), Gaps = 7/201 (3%) Strand=Plus/Plus Query 6454 TGTCCCTCTGTTCCACGGACTTACGATGGCAGATGATCTCACATCAGTGATCAAGAAGAT 6513 ||||||||| ||||| || | || ||||||||||| | | |||||| | || || || Sbjct 292276 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAAAAA-AT 292334 Query 6514 GATGGACAGTTCCTCGGGGCAGGGGTTGACAGATTACTC--AGC-TGTATGCATAGCCAA 6570 ||||| |||| || | || || || | || | ||| ||| ||| | || || || Sbjct 292335 GATGGGCAGTACCACAGGACAAGGACT---AGGTAACTACGAGCATGTTGGAATTGCTAA 292391 Query 6571 TCATATCGACTACGAAAAATGGAACAATCACCAGCGGAAAGAATCCAATGGGCCGGTATT 6630 || ||||| ||||||||||||||||||| ||| ||| |||| |||| || || || Sbjct 292392 CCACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTT 292451 Query 6631 CCGAGTAATGGGCCAATTCTT 6651 | ||||||||| |||| ||| Sbjct 292452 CAAAGTAATGGGTCAATCCTT 292472 Score = 96.9 bits (106), Expect = 2e-16 Identities = 145/202 (72%), Gaps = 7/202 (3%) Strand=Plus/Plus Query 6454 TGTCCCTCTGTTCCACGGACTTACGATGGCAGATGATCTCACATCAGTGATCAAGAAGAT 6513 ||||||||| ||||| || | || ||||||||||| | |||||||| | ||||| || Sbjct 273423 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAAAT 273482 Query 6514 GATGGACAGTTCCTCGGGGCAGGGGTTGACAGATTACT--CAGC-TGTATGCATAGCCAA 6570 ||||| |||| || || || || | || | ||| ||| || | || || || Sbjct 273483 GATGGGCAGTACCATAGGACAAGGACT---AGGTAACTACGAGCAGGTTGGAATTGCTAA 273539 Query 6571 TCATATCGACTACGAAAAATGGA-ACAATCACCAGCGGAAAGAATCCAATGGGCCGGTAT 6629 || ||||| |||||||||| || | |||| ||| ||| ||||| |||| || || | Sbjct 273540 CCACATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGT 273599 Query 6630 TCCGAGTAATGGGCCAATTCTT 6651 || ||||||||| |||| ||| Sbjct 273600 TCAAAGTAATGGGTCAATCCTT 273621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35707247456088