Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025392.1 Length=11121 Score E Sequences producing significant alignments: (Bits) Value seq1383 264 8e-67 seq283 109 4e-20 >seq1383 Length=104272 Score = 264 bits (292), Expect = 8e-67 Identities = 616/913 (67%), Gaps = 36/913 (4%) Strand=Plus/Plus Query 6263 TGATAATCGGACTCAAAGGAAAAGAGAGAGAATTGAAGATTGCAGGTAGATTCTTTTCAT 6322 || |||||||| | | || || || |||||| | || || | || |||||||| || | Sbjct 8307 TGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTT 8366 Query 6323 TGATGTCATGGAAATTGCGAGAATATTTTGTGATAACCGAATATCTGATCAAAACGCATT 6382 ||||||| ||| || | ||||||| ||||| || || || || ||||||||| ||| Sbjct 8367 TGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATT 8426 Query 6383 TTGTCCCTCTCTTTTATGGACTCACCATGGCTGATGATATGACTTCAGTCATCAAGAAAA 6442 ||| || || || | || | || ||||| || | ||||| | || |||||||| | Sbjct 8427 ATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGA 8486 Query 6443 TGCTAGAAAGTTCATCCGGTCAAGGGTTGAATGACTATTCTGCAATCTCAATCGCAAATC 6502 || |||| || || || || || || | |||||| || |||| |||| || || | Sbjct 8487 TGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACC 8546 Query 6503 ACATAGATTATGAGAAATGGAACAATCACCAGAGA-AGAACATCAAACGAACCTGTATTC 6561 |||| |||||||| ||||||||||||||||| ||| | || |||| | ||||||||| Sbjct 8547 ACATCGATTATGAAAAATGGAACAATCACCAAAGATATGAC-TCAACAGCCCCTGTATTC 8605 Query 6562 AAAGTGATGGGACAATTTCTGGGATATCCA--AATTTGATATCACGCACCCATGAATTCT 6619 | |||||||| ||||| | |||| ||| | ||| | || || || ||| | || | Sbjct 8606 ACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTT--TTTCTCGTACACATCAGTTTT 8663 Query 6620 TTGAGAAGAGTTTGATTTATTATAATGGAAGACCCGATTTGATGAGAGTCCGGAATGGAG 6679 || || | ||||| ||||||| |||| ||||||||| || |||| || | |||||| Sbjct 8664 TTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGA---TCAGTGATGGAG 8720 Query 6680 TGGTTGAGAAT-TCCTC-------AGATACTAGAGTATGTTGGAATGGACAAGCCGGGGG 6731 | | | | ||| |||| | | || |||||||||||||| || || Sbjct 8721 ----AAACATTATACTCGAAGGAAGGATA-TTGGGTCTGTTGGAATGGACAGCTAGGAGG 8775 Query 6732 TCTAGAGGGTTTGAGACAGAAGGGCTGGAGCATCCTAAATTTGTTGGTTATACAGAGGGA 6791 || || || | |||||| | || ||||| || |||| | | || || |||| || Sbjct 8776 GCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGA 8835 Query 6792 ATCCAAAATCCGTAATACATCTGTCAAGGTATTGGCACAAGGAGACAATCAAGTAATTTG 6851 || ||||| |||||||| || || |||||| ||||||||||| || || || || Sbjct 8836 ATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATG 8895 Query 6852 TACCCAATACAAGACTAAACAACATCGCTCGGAGA-TTGAGCTTAGAGGGGCATTGGAAC 6910 ||| || || || || | | || | | | | ||| | | | | | || Sbjct 8896 TACTCACTATAA----AATCCCAACCGTTAGAACACCTGAAGAAAAAAAGCCCCTCATAC 8951 Query 6911 A--GATGAAGTC-GAACAATCAAA--CAATAATGGATTCAATTGAGCGGGGAACAAACAG 6965 | || | || ||||| |||| | || ||| || || | | |||||||| | Sbjct 8952 AAGGAGCGATTCAGAACA--CAAATGCCATCATGAATGCAGTAGTCGATGGAACAAAGAA 9009 Query 6966 GCTTGGGCTTTTAATCAATCAAGATGAAACAATGCAATCGGCTGATTATCTTAATTACGG 7025 | | || | | |||||| || |||||| || ||||| || |||||| | ||||| || Sbjct 9010 GTTAGGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGG 9069 Query 7026 TAAAGTTCCAATCTTCCGAGGGGTCATACGAGGACTAGA-GACTAAAAGATGGTCCAGGG 7084 ||||| || ||||||| ||| || | | | || |||||| | ||| || Sbjct 9070 CAAAGTACCGATCTTCCAAGGAAATAT-CTTGCCGTTGATTACTAAACGTGTGTCAAGAA 9128 Query 7085 TGACCTGCGTCACCAATGATCAACTGCCTACTTGTGCTAATTTGCTGTCATCTGTCTCAA 7144 ||||||| || ||||||||||| | | | | | || ||| | || ||| | || || | Sbjct 9129 TGACCTGTGTGACCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATCTA 9188 Query 7145 CTAATGCATTGAC 7157 | ||||||||||| Sbjct 9189 CAAATGCATTGAC 9201 Score = 149 bits (164), Expect = 4e-32 Identities = 214/302 (71%), Gaps = 0/302 (0%) Strand=Plus/Plus Query 6235 GACAAACATGGACTGGATGATGATGATTTGATAATCGGACTCAAAGGAAAAGAGAGAGAA 6294 |||||| ||||||| | || || | |||||||||| | || ||| || | ||| Sbjct 21076 GACAAAAATGGACTAACCCAGGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAA 21135 Query 6295 TTGAAGATTGCAGGTAGATTCTTTTCATTGATGTCATGGAAATTGCGAGAATATTTTGTG 6354 | || || | || |||| || || | ||||| ||| || | || | || |||||| Sbjct 21136 GTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTG 21195 Query 6355 ATAACCGAATATCTGATCAAAACGCATTTTGTCCCTCTCTTTTATGGACTCACCATGGCT 6414 || || |||||||| |||||| | | ||| || || ||| | || | || ||||| Sbjct 21196 ATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCA 21255 Query 6415 GATGATATGACTTCAGTCATCAAGAAAATGCTAGAAAGTTCATCCGGTCAAGGGTTGAAT 6474 || |||||||| |||| || ||||||||| |||| ||||| | ||||| | | | Sbjct 21256 GACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCTAGAACAAGGACTCACT 21315 Query 6475 GACTATTCTGCAATCTCAATCGCAAATCACATAGATTATGAGAAATGGAACAATCACCAG 6534 ||||| || ||| |||||||||||||||| || |||||||||||||| || || || Sbjct 21316 GACTACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAAATGGAATAACCATCAA 21375 Query 6535 AG 6536 || Sbjct 21376 AG 21377 Score = 123 bits (136), Expect = 2e-24 Identities = 176/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 6289 AGAGAATTGAAGATTGCAGGTAGATTCTTTTCATTGATGTCATGGAAATTGCGAGAATAT 6348 |||||| | || || | || |||| || || | | ||| ||| || | || || || Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 6349 TTTGTGATAACCGAATATCTGATCAAAACGCATTTTGTCCCTCTCTTTTATGGACTCACC 6408 |||||||| || |||||||| |||||| | | ||| || || ||| | || | || Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 6409 ATGGCTGATGATATGACTTCAGTCATCAAGAAAATGCTAGAAAGTTCATCCGGTCAAGGG 6468 ||||| || ||||||| | ||||||||||||||| | || || || || ||| | Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 6469 TTGAATGACTATTCTGCAATCTCAATCGCAAATCACATAGATTATGAGAAATGGAACAAT 6528 | | |||||||| |||| |||||||||| || || || |||||||| |||||||| Sbjct 38093 CTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAAC 38152 Query 6529 CACCAGAG 6536 || || || Sbjct 38153 CATCAAAG 38160 >seq283 Length=322283 Score = 109 bits (120), Expect = 4e-20 Identities = 241/357 (68%), Gaps = 6/357 (2%) Strand=Plus/Plus Query 6265 ATAATCGGACTCAAAGGAAAAGAGAGAGAATTGAAGATTGCAGGTAGATTCTTTTCATTG 6324 ||||| || | ||||| ||||| |||||| | | | ||| ||||| || ||| Sbjct 271948 ATAATATGATTGAAAGGGAAAGAAAGAGAAATCAGAAAGACAGACGATTTCTTCTCTTTG 272007 Query 6325 ATGTCATGGAAATTGCGAGAATATTTTGTGATAACCGAATATCTGATCAAAACGCATTTT 6384 || |||| ||| | |||||||| || || ||||| ||||| || || | | | | | Sbjct 272008 ---TCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTAT 272064 Query 6385 GTCCCTCTCTTTTATGGACTCACCATGGCTGATGATATGACTTCAGTCATCAAGAAAATG 6444 || |||||||| ||| | ||||| ||||| ||||| ||||| | ||||||||| Sbjct 272065 GTTCCTCTCTTCCATGTTTTG-CCATGAAAGATGACATGACATCAGTTGTAAAGAAAATG 272123 Query 6445 CTAGAAAGTTCATCCGGTCAAGGGTTGAATGACTATTCTGCAATCTC-AATCGCAAATCA 6503 | || ||| | || ||||| | || |||| ||| | ||| || || || Sbjct 272124 ATGGACAGTACCATAGGACAAGGACTAGATAACTACAA-GCATGTTGGAATTGCTAACCA 272182 Query 6504 CATAGATTATGAGAAATGGAACAATCACCAGAGAAGAACATCAAACGAACCTGTATTCAA 6563 ||| ||||| || || ||||| || || || |||| | | | || |||| || ||||| Sbjct 272183 CATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAA 272242 Query 6564 AGTGATGGGACAATTTCTGGGATATCCAAATTTGATATCACGCACCCATGAATTCTT 6620 || ||||| |||| | |||| | ||| || | | | |||||||||||||| Sbjct 272243 TGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTT 272299 Score = 89.7 bits (98), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 6384 TGTCCCTCTCTTTTATGGACTCACCATGGCTGATGATATGACTTCAGTCATCAAGAAAAT 6443 |||||||||||| |||| | |||||||| ||||| |||| ||||| | || ||||| Sbjct 292276 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAA-AAAAT 292334 Query 6444 GCTAGAAAGTTCATCCGGTCAAGGGTTGAATGACTATTCTGCAATCTC-AATCGCAAATC 6502 | | | ||| | | || ||||| | | |||| ||| | ||| || || | Sbjct 292335 GATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGA-GCATGTTGGAATTGCTAACC 292393 Query 6503 ACATAGATTATGAGAAATGGAACAATCACCAGAGAAGAACATCAAACGAACCTGTATTCA 6562 |||| ||||| || ||||||||||||| ||||| | ||| || ||||| || |||| Sbjct 292394 ACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTCA 292453 Query 6563 AAGTGATGGGACAAT 6577 |||| ||||| |||| Sbjct 292454 AAGTAATGGGTCAAT 292468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35448221211780