Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025394.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq1383 203 2e-48 seq283 123 2e-24 >seq1383 Length=104272 Score = 203 bits (224), Expect = 2e-48 Identities = 423/625 (68%), Gaps = 4/625 (1%) Strand=Plus/Plus Query 6237 GAAGGATTGCCGGAAGATGATCTGGTAATTGGACTCAAAGGGAAGGAAAGGGAGTTGAAG 6296 ||||||||| ||| || |||||||| ||| | | || |||||||| || | || Sbjct 8285 GAAGGATTGGGTAGAGAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAA 8344 Query 6297 ATCGCAGGTCGATTCTTTTCGTTAATGTCTTGGAGATTACGGGAATACTTTGTAATTACT 6356 ||| | || ||||||| || || ||||| ||| | | | ||||||||||| || || Sbjct 8345 ATCTCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACA 8404 Query 6357 GAGTATTTGATTAAAACACACTTTGTTCCGTTATTTCATGGATTGACTATGGCAGATGAT 6416 ||||| |||| ||| | | | ||| || | || | || || || ||||| || | Sbjct 8405 GAGTACCTGATCAAAGAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAAC 8464 Query 6417 ATGACGGCTGTGATCaaaaaaaTGATGGAGAGTTCATCAGGTCAGGGTCTCAACGATTAT 6476 ||||| | |||||||| || ||||| || || || || ||||| | | || || Sbjct 8465 ATGACCACCGTGATCAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTAC 8524 Query 6477 TCTTCAATATGTCTGGCTAATCACATTGATTATGAGAAATGGAACAATCATCAGAGAAAA 6536 || ||| | || || ||||| |||||||| |||||||||||||| || ||| | Sbjct 8525 TCCCAAATCGCAATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATAT 8584 Query 6537 GAGTCAAATGGACCTGTTTTCCGTGTCATGGGTCAGTTCTTGGGATTTCCTAACCTTATA 6596 || |||| | ||||| ||| ||| ||||| | || || ||||| || ||| | Sbjct 8585 GACTCAACAGCCCCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTT 8644 Query 6597 TCCAGGACTCATGAATTCTTTGAAAAAAGTCTGATATATTACAATGGGAGACCAGATTTG 6656 || | || ||| | || ||| | ||||| | | |||||||||| ||||| || || Sbjct 8645 TCTCGTACACATCAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTA 8704 Query 6657 ATGA-AAGTGCAAGGAAATTCATTAGTCAATAA-CAGCAATCAGCGGGTATGTTGGAACG 6714 |||| |||| | ||| | ||||| | || | || | |||| |||||||| | Sbjct 8705 ATGATCAGTG-ATGGAGAAACATTATACTCGAAGGAAGGAT-ATTGGGTCTGTTGGAATG 8762 Query 6715 GACAGGCAGGAGGTTTGGAGGGCTTGAGGCAAAAGGGATGGAGTATTTTGAACCTATTGG 6774 ||||| |||||| | || || | || || | || |||||||| || ||||| | | Sbjct 8763 GACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAG 8822 Query 6775 TTATCCAGCGAGAATCCAAGATCAGAAATACCGCAGTGAAGGTGTTGGCACAGGGTGATA 6834 | | || |||||| || || | |||||| |||||| ||||| || || || | Sbjct 8823 TACTAGAGAGAGAATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACA 8882 Query 6835 ATCAAGTAATCTGTACTCAATACAA 6859 | || || || |||||||| || || Sbjct 8883 ACCAGGTTATATGTACTCACTATAA 8907 Score = 145 bits (160), Expect = 5e-31 Identities = 203/283 (72%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 6252 GATGATCTGGTAATTGGACTCAAAGGGAAGGAAAGGGAGTTGAAGATCGCAGGTCGATTC 6311 || || || ||||| ||||| | || ||||||| ||| | || || | || ||||| Sbjct 21097 GAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTT 21156 Query 6312 TTTTCGTTAATGTCTTGGAGATTACGGGAATACTTTGTAATTACTGAGTATTTGATTAAA 6371 || ||| | ||||||||| | |||| | |||||||| || || || ||| | || ||| Sbjct 21157 TTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAA 21216 Query 6372 ACACACTTTGTTCCGTTATTTCATGGATTGACTATGGCAGATGATATGACGGCTGTGATC 6431 | ||| ||| ||| | ||| | || || ||||||||||| ||||||| | || || Sbjct 21217 GAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATA 21276 Query 6432 aaaaaaaTGATGGAGAGTTCATCAGGTCAGGGTCTCAACGATTATTCTTCAATATGTC-- 6489 || |||||||| || ||||| || || || |||| || || || | | || | Sbjct 21277 AAGAAAATGATAGACAGTTCTCTAGAACAAGGACTCACTGACTA--CTCCCAGATCACAA 21334 Query 6490 TGGCTAATCACATTGATTATGAGAAATGGAACAATCATCAGAG 6532 | || ||||||||||| |||||||||||||| || ||||| || Sbjct 21335 TCGCAAATCACATTGACTATGAGAAATGGAATAACCATCAAAG 21377 >seq283 Length=322283 Score = 123 bits (136), Expect = 2e-24 Identities = 259/378 (69%), Gaps = 16/378 (4%) Strand=Plus/Plus Query 6262 TAATTGGACTCAAAGGGAAGGAAAGGGAGTTGAAGATCGCAGGTCGATT-CTTTTCGTTA 6320 |||| || | |||||||| ||||| || | | | ||| ||||| ||| || || Sbjct 271949 TAATATGATTGAAAGGGAAAGAAAGAGAAATCAGAAAGACAGA-CGATTTCTTCTCTTT- 272006 Query 6321 ATGTCTTGGAGATTACGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACACACTTT 6380 |||||||| || ||||||| || |||||||| |||||| | ||||| | | | | Sbjct 272007 --GTCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTAT 272064 Query 6381 GTTCCGTTATTTCATGGATTGACTATGGCAGATGATATGACGGCTGTGATCaaaaaaaTG 6440 ||||| | || |||| ||| | ||| |||||| ||||| | || | || |||||| Sbjct 272065 GTTCCTCTCTTCCATGTTTTGCC-ATGAAAGATGACATGACATCAGTTGTAAAGAAAATG 272123 Query 6441 ATGGAGAGTTCATCAGGTCAGGGTCTCAACGATTATTCTTCAAT-ATGTCTG----GCTA 6495 ||||| ||| | ||| || || || ||| | || ||| |||| | |||| Sbjct 272124 ATGGACAGTACCATAGGACAAGGACTA---GATAA--CTACAAGCATGTTGGAATTGCTA 272178 Query 6496 ATCACATTGATTATGAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCTGTTT 6555 | ||||| ||||| || || ||||| || ||||| |||| | | ||| ||| || | Sbjct 272179 ACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGT 272238 Query 6556 TCCGTGTCATGGGTCAGTTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAATTCT 6615 || ||| |||||| | ||||| ||||| |||| || | | | ||| |||||||||| Sbjct 272239 TCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCT 272298 Query 6616 TTGAAAAAAGTCTGATAT 6633 | || |||| | |||| Sbjct 272299 TCCAACAAAGCTTTATAT 272316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35390659824156