Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025400.1 Length=15444 Score E Sequences producing significant alignments: (Bits) Value seq1383 179 4e-41 seq283 95.1 1e-15 >seq1383 Length=104272 Score = 179 bits (198), Expect = 4e-41 Identities = 531/813 (65%), Gaps = 16/813 (2%) Strand=Plus/Plus Query 10562 GGATTAGATTGGGAGAAGTTGGTGATAGGTTTAAAAGCCAAAGAAAGGGAGCTTAAAGAA 10621 ||||| | | | || || |||| || || |||| |||||| ||||| || | ||| Sbjct 8288 GGATTGGGTAGAGAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATC 8347 Query 10622 GAAGGCAGGTTTTTCTCTTTAATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAA 10681 || || || |||||||| ||| | || | ||||| |||||||| || || Sbjct 8348 TCGGGAAGATTCTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAG 8407 Query 10682 TACTTGATCAAAAAATATTATGTACCATTATTCGAAGGACTTACAATGGCGGATGATTTG 10741 ||| |||||||| |||||||||||||| | ||| |||| | ||||||||||| | || Sbjct 8408 TACCTGATCAAAGAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATG 8467 Query 10742 AATACAGTCATCAAAAAGATGCTGGATGTGTCCTCCGGCCAAGGAACAAGAAACTATGAT 10801 | || || ||||| |||||| | ||| ||| || || ||| || |||| Sbjct 8468 ACCACCGTGATCAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCC 8527 Query 10802 TATGTGTCAATAGCTAACAATATTGATTATGAAAAATGGAATAATTATCAAAGAAAAGAA 10861 | | |||| || ||| | || ||||||||||||||||| ||| | |||||| | || Sbjct 8528 CAAATCGCAATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGAC 8587 Query 10862 TCAAATGGACCAGTATTCAGAGTAATGGGGCAATTCCTTGGAATGGAA--AATTTGATAG 10919 |||| | || ||||||| || |||||| |||| ||||| | | | ||| | Sbjct 8588 TCAACAGCCCCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTT--TTT 8645 Query 10920 TTCGGACACATGAATTCTTTGAAAATAGTTTGGTTTATTATAACCAGCGAGCAGATTTAA 10979 ||| |||||| | || ||| | | ||||| |||||||| || | || | || |||| Sbjct 8646 CTCGTACACATCAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAA 8705 Query 10980 TGATGGTACAAGGAAGAAATTGTTTAAACAGAA--CAGGAACCAAGGTGTGTTGGGAGGG 11037 |||| | || ||||| | || | ||| |||| ||| |||||| | || Sbjct 8706 TGATCAGTGATGG-AGAAACATTATACTC-GAAGGAAGGATATTGGGTCTGTTGGAATGG 8763 Query 11038 TCAAAAAGGGGGATTAGAGGGGCTGAGGCAAAAGGGATGGAGCATATTGAATTATTTAAT 11097 || ||| || | || || || || || | || ||||| ||||| || || | Sbjct 8764 ACAGCTAGGAGGGCTCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGT 8823 Query 11098 GATANNNNNNNNNNNTAAGATAAGAAATACCAAAGTTAAAATATTAGCTCAAGGAGACAA 11157 || ||| ||| | |||||| ||| || | ||| |||||||||||||| Sbjct 8824 ACTAGAGAGAGAATGTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAA 8883 Query 11158 TCAGACTATAAGTATGCATTACAAGA--CTGAAAGTTGGCA-AGATGAAGAGGAGCTGAG 11214 ||| |||| ||| || || || | | | ||| | | | |||||| | | Sbjct 8884 CCAGGTTATATGTACTCACTATAAAATCCCAACCGTTAGAACACCTGAAGAAAA----AA 8939 Query 11215 AG-AACACATACAGAGAATGGCTGAGAATAACAACCAAATAATGGATGCAATAATAGAAG 11273 || | |||||| || | | |||| | || || ||| ||||| || | || | Sbjct 8940 AGCCCCTCATACAAGGAGCGATTCAGAACACAAATGCCATCATGAATGCAGTAGTCGATG 8999 Query 11274 GAACAAATAAGCTGGGACTTAGAATAAATCATGATGAGACCATGACTTCTGCAGATTACA 11333 ||||||| ||| | ||| | | || ||| | ||| ||||| || |||||||| | Sbjct 9000 GAACAAAGAAGTTAGGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATA 9059 Query 11334 TAAATTACGGGAAGGTTCCGATCATTGAAGGAA 11366 | ||||| || || || |||||| | |||||| Sbjct 9060 TGAATTATGGCAAAGTACCGATCTTCCAAGGAA 9092 >seq283 Length=322283 Score = 95.1 bits (104), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 10700 TATGTACCATTATTCGAAGGACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAG 10759 ||||| || | ||| | || | || ||||| ||||| |||| |||| | ||||| Sbjct 292274 TATGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAAAAA- 292332 Query 10760 ATGCTGGATGTGTCCTCCGGCCAAGGAACAAGAAACTATGATTATGTGTCAATAGCTAAC 10819 ||| ||| || | || |||||| | | ||||| || |||| ||| |||||| Sbjct 292333 ATGATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAAC 292392 Query 10820 AATATTGATTATGAAAAATGGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTATTC 10879 | || ||||| ||||||||||| ||| || || | |||| |||| |||||| ||| Sbjct 292393 CACATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTC 292452 Query 10880 AGAGTAATGGGGCAATTCCTTGGAATGGAAAATT 10913 | ||||||||| |||| | || || ||| |||| Sbjct 292453 AAAGTAATGGGTCAATCCTTTAGATTGGTTAATT 292486 Score = 91.5 bits (100), Expect = 1e-14 Identities = 119/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 10778 GGCCAAGGAACAAGA-AACTATGATTATGTGTCAATAGCTAACAATATTGATTATGAAAA 10836 || |||||| | ||| ||||| | |||| ||| |||||| | || ||||| ||||| Sbjct 272139 GGACAAGGA-CTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGATTACGAAAA 272197 Query 10837 ATGGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTATTCAGAGTAATGGGGCAATT 10896 |||||||| ||||||||| || | ||| |||||| |||| |||||||| |||| Sbjct 272198 TTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAATGGGTAAATT 272257 Query 10897 CCTTGGAATGGAAAATTTGATAGTTCGGACACATGAATTCTT 10938 | ||||| ||| ||| || | | ||| ||||||||||| Sbjct 272258 CTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTT 272299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49268431894367