Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025405.1 Length=11124 Score E Sequences producing significant alignments: (Bits) Value seq1383 120 2e-23 >seq1383 Length=104272 Score = 120 bits (132), Expect = 2e-23 Identities = 233/342 (68%), Gaps = 9/342 (3%) Strand=Plus/Plus Query 6281 AGATGATCTTATAATTGGATTGAGAGCAAAGGAGAGAGAGTTGAAGAACAAAGGACGATT 6340 ||| || || |||| ||||| ||||| ||||| ||||| | || | | ||| |||| Sbjct 8299 AGAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATT 8358 Query 6341 CTTTGCACTGATGTCTTGGAGACTTAGAGAATATTTTGTGGTCACAGAATATTTGATCAA 6400 ||| | ||||||| ||| ||| |||||||| ||||| ||||||| || ||||||| Sbjct 8359 CTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAA 8418 Query 6401 AAAGCATTACATCCCTTTGTTCAAAGGCTTGACCATGGCGGATGATCTAAATACAGTAAT 6460 | | |||| | || | ||||||||||| || |||||||| | | | || || || Sbjct 8419 AGAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGAT 8478 Query 6461 AGAAAAGATGATTCAGAGCACAAGCGGTCA-TGAT--AGAGAAGATAGCCGAAGACTTGT 6517 | |||||||| | ||| | || || ||| | || | || || | Sbjct 8479 CAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAA------T 8532 Query 6518 CACCGTCTGCAACCATTTGGATTATGAAAAATGGAACAACAATCAAAGGGATGAGTCAAA 6577 | | | |||||| | |||||||||||||||||||| | ||||| |||| |||| Sbjct 8533 CGCAATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAAC 8592 Query 6578 CCATGCGGTATTCAAAGTGATGGGCCAATTTTTAGGATTTCC 6619 | ||||||| |||||||| ||||||| ||||| || Sbjct 8593 AGCCCCTGTATTCACTGTGATGGGGAAATTTTTTGGATTACC 8634 Score = 84.2 bits (92), Expect = 2e-12 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 6282 GATGATCTTATAATTGGATTGAGAGCAAAGGAGAGAGAGTTGAAGAACAAAGGACGATTC 6341 || || ||| |||| ||| | ||||||||||| | || | || | |||||||| Sbjct 21097 GAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTT 21156 Query 6342 TTTGCACTGATGTCTTGGAGACTTAGAGAATATTTTGTGGTCACAGAATATTTGATCAAA 6401 || | || ||||||||| ||| | | || |||||| |||| |||||| | |||||| Sbjct 21157 TTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAA 21216 Query 6402 AAGCATTACATCCCTTTGTTCAAAGGCTTGACCATGGCGGATGATCTAAATACAGTAATA 6461 | | || | || |||| ||||| || || ||||| || || | | |||||| ||| Sbjct 21217 GAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATA 21276 Query 6462 GAAAAGATGAT 6472 | || ||||| Sbjct 21277 AAGAAAATGAT 21287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35457814776384