Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_025406.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq1383 212 4e-51 seq283 93.3 3e-15 >seq1383 Length=104272 Score = 212 bits (234), Expect = 4e-51 Identities = 413/604 (68%), Gaps = 16/604 (3%) Strand=Plus/Plus Query 6310 GTCATAGGATTAAAAGGTAAGGAAAGAGAGCTGAAACAAGCAGGTAGATTCTTTTCATTG 6369 || || ||||||| || ||||||||||| | ||| | || |||||||| || ||| Sbjct 8309 GTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTG 8368 Query 6370 ATGTCATGGGAGTTACGAGAGTACTTTGTCATTACCGAATATTTAATAAAACACCATTTT 6429 ||||| ||||| | |||| ||||||||||| || || || | || ||| | ||| | Sbjct 8369 ATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTAT 8428 Query 6430 GTACCTCTATTTAAGGGATTAACAATGGCAGATGATATGACAGAAGTGATCAAAAAGATG 6489 ||||| || || || || ||||||||||| || | ||||| |||||||| |||||| Sbjct 8429 GTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATG 8488 Query 6490 CTGGAAAGAAGTCAAGGCCAAGGAGAATTAGACTATCAACATGTGAGCATAGCGAACCAT 6549 | || || | || || ||| | ||||| || | || || ||||| Sbjct 8489 ATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCAC 8548 Query 6550 ATAGATTATGAAAAGTGGAACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCCGT 6609 || ||||||||||| ||||||||||| ||||| | || |||| | || || ||| | Sbjct 8549 ATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACT 8608 Query 6610 GTGATGGGCCAATTCTTGGGCTATCCATCTTTGATAGAGAGAACGCATGAGTTCTTTGAG 6669 |||||||| |||| || || | ||| | | | | || ||| |||| ||| || Sbjct 8609 GTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTAAG 8668 Query 6670 AAAAGTCTTGTTTATTACAATGGTAGACCAGACTTGATGA------AGGTAGAAA-ATGG 6722 ||||| | ||||||||||||| ||||| ||||| |||| | | ||||| || Sbjct 8669 GAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGAAACAT-- 8726 Query 6723 TGTAGTATTGAATAAAACAGATAATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGA 6782 || | ||| || ||| ||| || || |||||||| || ||| ||| | || Sbjct 8727 --TATACTCGAAGGAA--GGAT-ATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGA 8781 Query 6783 GGGACTGAGACAAAAAGGTTGGAGTATACTCAACTTGTTGGTGATTAGA-CGTGAGTCCA 6841 ||||| ||||| | || ||||||||| | ||| | | || | |||| | || | | Sbjct 8782 AGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGT-ACTAGAGAGAGAATGTA 8840 Query 6842 AAATCCGCAATACAAGGGTTCAGACATTAGCACAGGGAGACAATCAAGTGATCTGTACAC 6901 |||| || ||||| | || | ||||| || || |||||||| || || || ||||| | Sbjct 8841 AAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTC 8900 Query 6902 AGTA 6905 | || Sbjct 8901 ACTA 8904 Score = 120 bits (132), Expect = 2e-23 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 6356 GATTCTTTTCATTGATGTCATGGGAGTTACGAGAGTACTTTGTCATTACCGAATATTTAA 6415 |||| || || | | ||| ||||| |||| ||||||||||| || || |||||| ||| Sbjct 37935 GATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTACTTTGTGATCACGGAATATCTAA 37994 Query 6416 TAAAACACCATTTTGTACCTCTATTTAAGGGATTAACAATGGCAGATGATATGACAGAAG 6475 | ||| | | | |||||| || ||||| || ||||| ||||| || ||||||| | Sbjct 37995 TCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCCGACAATATGACCACTG 38054 Query 6476 TGATCAAAAAGATGCTGGAAAGAAGTCAAGGCCAAGGAGAATTAGACTATCAACATGTGA 6535 | ||||| || ||| | || ||| || || ||| | |||||| ||| | | Sbjct 38055 TCATCAAGAAAATGATTGACAGATCTCTGGGACAATGCCTCACGGACTATTCACAAATCA 38114 Query 6536 GCATAGCGAACCATATAGATTATGAAAAGTGGAACAATCATCAAAG 6581 || || |||||||| || ||||| ||||||||||| |||||||| Sbjct 38115 CAATCGCAAACCATATCGACTATGAGAAGTGGAACAACCATCAAAG 38160 Score = 96.9 bits (106), Expect = 2e-16 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 7006 AATAAACTAGGTCTGATCATCAATAATGATGAAACAATACAAAGTGCAGATTTCCTTACA 7065 || ||||| ||||| || |||||| | ||| || || ||| ||||||| | | | Sbjct 29221 AAGAAACTTGGTCTAATAATCAATGAGAGTGAGACGATCCAATCAGCAGATTACATGAAC 29280 Query 7066 TATGGGAAAGTCCCAATTTTCAGGGGTAACATAAGAGGTTTAGAGACAAAAAGGTGGTCT 7125 ||||||||||| || | || || || ||||| |||| || || || |||| Sbjct 29281 TATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTCCCATTAGTCACCAAGAGAGTGTCT 29340 Query 7126 CGGGTGACTTGTGTCACAAATGATCAATTGCCATCTTTGGCCAATGTCTTATCTTCTGTC 7185 | |||| ||||| |||||||||||| | ||||| || || |||||| | ||| | || Sbjct 29341 AGAATGACCTGTGTAACAAATGATCAAATCCCATCCTTTGCAAATGTCCTCTCTGCAGTG 29400 Query 7186 TCAACTAATGCGTTGACA 7203 ||||| || || |||||| Sbjct 29401 TCAACCAACGCTTTGACA 29418 >seq283 Length=322283 Score = 93.3 bits (102), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 6429 TGTACCTCTATTTAAGGGATTAACAATGGCAGATGATATGACAGAAGTGATCAAAAAGAT 6488 ||| ||||| || | || || || ||||||||||| |||| | ||| | ||||| || Sbjct 292276 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGT-AAAAAAAT 292334 Query 6489 GCTGGAAAGAAGTCAAGGCCAAGGAGAATTAGACTATCAACATGTGAGCATAGCGAACCA 6548 | ||| || | ||| |||||| | |||| | ||||| | || || ||||| Sbjct 292335 GATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAACCA 292394 Query 6549 TATAGATTATGAAAAGTGGAACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCCG 6608 || ||||| ||||| |||||||||| || |||| |||| |||| |||||| ||| Sbjct 292395 CATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTCAA 292454 Query 6609 TGTGATGGGCCAATTCTT 6626 || ||||| |||| ||| Sbjct 292455 AGTAATGGGTCAATCCTT 292472 Score = 80.6 bits (88), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 6429 TGTACCTCTATTTAAGGGATTAACAATGGCAGATGATATGACAGAAGTGATCAAAAAGAT 6488 ||| ||||| || | || || || ||||||||||| |||||| ||| | || || || Sbjct 273423 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAAAT 273482 Query 6489 GCTGGAAAGAAGTCAAGGCCAAGGAGAATTAGACTATCAACATGTGAGCATAGCGAACCA 6548 | ||| || | ||| |||||| | |||| | || || | || || ||||| Sbjct 273483 GATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAACCA 273542 Query 6549 TATAGATTATGAAAAGTGGA-ACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCC 6607 || ||||| ||||| | || | |||| || |||| ||||| |||| |||||| ||| Sbjct 273543 CATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTTCA 273602 Query 6608 GTGTGATGGGCCAATTCTT 6626 || ||||| |||| ||| Sbjct 273603 AAGTAATGGGTCAATCCTT 273621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35512178309140