Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028230.1 Length=12020 Score E Sequences producing significant alignments: (Bits) Value seq1383 170 1e-38 seq283 104 2e-18 >seq1383 Length=104272 Score = 170 bits (188), Expect = 1e-38 Identities = 596/911 (65%), Gaps = 32/911 (4%) Strand=Plus/Plus Query 7189 TGATAATCGGATTAAAAGCAAAAGAAAGGGAGATGAAAAGAATC---GGAAGAttttttt 7245 || |||||||||||| ||| || |||| |||| | ||| |||| |||||||| || | Sbjct 8307 TGGTAATCGGATTAAGAGCCAAGGAAA--GAGAAGTAAA-AATCTCGGGAAGATTCTTCT 8363 Query 7246 CATTAATGTCTTGGGAATTAAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaaT 7305 | || ||||| |||||| | |||||||| ||||| || || || ||||| ||| ||| Sbjct 8364 CTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAAT 8423 Query 7306 ATTATGTTCCATTATTCAAGGGATTGACAATGGCAGATGGATTAATGACAGTGGTGAAGA 7365 ||||||| ||| | ||||| || || |||||||| || | | || ||| | |||| Sbjct 8424 ATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGA 8483 Query 7366 AAATGATTGATTCATCATGCGGGCAAGGA-AATCTAGATTACAACACTGTATCAATTGCC 7424 | ||||| ||| || || || ||| | || || ||| | | |||||||| Sbjct 8484 AGATGATAGATAGCTCCCTGGGACAGGGATTAACT-GACTACTCCCAAATCGCAATTGCC 8542 Query 7425 AATCATATAGATTATACAAAGTGGAACAATCACCAGAGAAGGAAGTCCAATCACCCTGTT 7484 || || || |||||| ||| |||||||||||||| ||| | || | |||||| Sbjct 8543 AACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTA 8602 Query 7485 TTTACTGTGAT-GGGACAGTTTTTGGGGTACCCGAACCTGATCACTAGAACTCATGAGTT 7543 || |||||||| |||| | ||||||| |||| | | || | || | || ||| |||| Sbjct 8603 TTCACTGTGATGGGGAAATTTTTTGGATTACCAGCA-CTTTTTTCTCGTACACATCAGTT 8661 Query 7544 CTTCGAAAAAAGCTGGATATATTATGCAGGCCGAGCTGACAAAATTTGGACTGACGGACG 7603 || | |||| | | ||||| | || | ||| ||| | ||| ||| Sbjct 8662 TTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGA 8721 Query 7604 GAGGATATAC---AATCAAGGATCAGGGAAGTACTGTTGGGATGGACAAGCAGGTGGGTT 7660 | ||||| || |||||| || || ||||||| ||||||| ||| ||| | Sbjct 8722 AACATTATACTCGAAGGAAGGATATTGG--GT-CTGTTGGAATGGACAGCTAGGAGGGCT 8778 Query 7661 GGAAGGATTACGGCAAAAGGGGTGGACTATACTCAATTATTTGGTCATTGAGAGGGAATC 7720 |||||| | | || | ||||||| |||| | || | || | ||||| |||| Sbjct 8779 CGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATG 8838 Query 7721 TAAAAGAAGAAATACATTAATTAAGGTGTTAGCACAAGGGGACAATCAGACCATAACAAC 7780 ||||| | | ||||| | | || || || ||||| ||||| ||| ||| || Sbjct 8839 TAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTAC 8898 Query 7781 AACTTATAAAA-CTCAA--GTTTACAGGACAGAAGATGAACTAAA----ATCAAATTTGG 7833 ||||||| | ||| ||| || ||| || ||| ||| ||| | || Sbjct 8899 TCACTATAAAATCCCAACCGTT---AGAACACCTGAAGAAAAAAAGCCCCTCATACAAGG 8955 Query 7834 AAAAAATGGTAGAAAACAATCAAAGCATACTTGATTCAATAATTTCAGGGACTAAAAAAT 7893 | | | |||| |||| | ||| | || || || | || || || || | Sbjct 8956 AGCGATT--CAGAACACAA--ATGCCATCATGAATGCAGTAGTCGATGGAACAAAGAAGT 9011 Query 7894 TGGGTCTTATAATAAACAAAGATGAAACTGTACAGGCAGCAGATTACATGAATTACGGGA 7953 | || | || || || ||| |||||| |||| |||||||||| |||||||| || | Sbjct 9012 TAGGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGCA 9071 Query 7954 AAGTTCCAATTTACAGAGGAGTTAT-TAGAGGTTTGACTGGTAAAAGATGGTCAAGAGCA 8012 |||| || || | | |||| ||| | | | |||| | |||| | ||||||| Sbjct 9072 AAGTACCGATCTTCCAAGGAAATATCTTGCCG-TTGATTACTAAACGTGTGTCAAGAATG 9130 Query 8013 AACTTTGTTACAAACGATCAGCTTCCCTCATTATCCAATGTAATAAGCTCAGTATCAACA 8072 | || ||| || || |||||| | | ||||| |||||| | ||||||| ||| Sbjct 9131 ACCTGTGTGACCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATCTACA 9190 Query 8073 AACGCATTGAC 8083 || |||||||| Sbjct 9191 AATGCATTGAC 9201 Score = 98.7 bits (108), Expect = 8e-17 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 7192 TAATCGGATTAAAAGCAAAAGAAAGGGAGATGAAAAGAATCGGAAGAtttttttCATTAA 7251 |||||||| ||| |||||| |||| ||| | |||| | ||| ||||||| || | | Sbjct 21107 TAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTA 21166 Query 7252 TGTCTTGGGAATTAAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaaTATTATG 7311 ||||||||||| || | | || ||||| || |||||||| || ||| |||| |||| Sbjct 21167 TGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATG 21226 Query 7312 TTCCATTATTCAAGGGATTGACAATGGCAGATGGATTAATGACAGTGGTGAAGAAAATGA 7371 | || | || || || || || |||||||| | | ||||| | |||||||||| Sbjct 21227 TACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGA 21286 Query 7372 TTGA 7375 | || Sbjct 21287 TAGA 21290 >seq283 Length=322283 Score = 104 bits (114), Expect = 2e-18 Identities = 271/402 (67%), Gaps = 16/402 (4%) Strand=Plus/Plus Query 7168 AAGGTTTACCAGATGATGTTTTGATAATCGGATTAAAAGCAAAAGAAAGGGAGATGA-AA 7226 ||||| | |||||| | | | ||||| |||| |||| |||||||| || || | || Sbjct 271925 AAGGTCTCCCAGATAAAGAACTAATAATATGATTGAAAGGGAAAGAAAGAGAAATCAGAA 271984 Query 7227 AGAATCGGAAGAtttttttCATTAATGTCTTGGGAATTAAGAGAATATTTTGTTTCTACT 7286 ||| | || ||||| || || |||||||| || || |||||||| || ||| Sbjct 271985 AGA--CAGACGATTTCTTCTCTT--TGTCTTGGACCTTGAGGGAATATTTCGTAATTACC 272040 Query 7287 GAATATCTGATaaaaaaaTATTATGTTCCATTATTCAAGGGATTGACAATGGCAGATGGA 7346 || ||||| || || | | |||||||| | ||| | | ||| || || ||||| Sbjct 272041 GAGTATCTCATTAAGATGGAGTATGTTCCTCTCTTCCATGTTTTGCCA-TGAAAGATGAC 272099 Query 7347 TTAATGACAGTGGTGAAGAAAATGATTGA-TTCATCATGCGGGCAAGGAAATCTAGAT-- 7403 | | |||| || ||||||||||| || | ||| || |||||| |||||| Sbjct 272100 ATGACATCAGTTGTAAAGAAAATGATGGACAGTACCAT-AGGACAAGGA---CTAGATAA 272155 Query 7404 -TACAACACTGTATCAATTGCCAATCATATAGATTATACAAAGTGGAACAATCACCAGAG 7462 ||||| ||| |||||| || || || ||||| ||| ||||| || || || || Sbjct 272156 CTACAAGCATGTTGGAATTGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAG 272215 Query 7463 AAGGAAGTCCAATCACCCTGTTTTTACTGTGATGGGACAGTTTTTGGGGTACCCGAACCT 7522 || || | ||| | || || || | ||| ||||| | || || || | | || || Sbjct 272216 AATTAAAGCTAATAAACCAGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCT 272275 Query 7523 GATC-ACTAGAACTCATGAGTTCTTCGAAAAAAGCTGGATAT 7563 | || || || || ||||| |||||| || |||||| |||| Sbjct 272276 GTTCTACCAG-ACCCATGAATTCTTCCAACAAAGCTTTATAT 272316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38323092738112