Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028234.1 Length=12162 Score E Sequences producing significant alignments: (Bits) Value seq1383 131 1e-26 seq283 95.1 9e-16 >seq1383 Length=104272 Score = 131 bits (144), Expect = 1e-26 Identities = 256/376 (68%), Gaps = 2/376 (1%) Strand=Plus/Plus Query 7373 GAAGATCTCTTGATTGGATTAAAGGCCAAAGAAAGAGAACTGAAAAGGAAAGGTAGAttt 7432 ||||| || | || ||||||| ||||| ||||||||| | |||| || ||||| Sbjct 8300 GAAGAGCTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTC 8359 Query 7433 ttttCTCTAATGACTTGGAGATTGAGAGAATACTTTGTTGCAACTGAATTCCTGATTAAA 7492 || ||| | ||| | ||| | | |||||||||||||| || || | |||||| ||| Sbjct 8360 TTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAA 8419 Query 7493 AAACATTTTGTCCCTCTATTTGAGGGACTAACTATGGCAGATGATTTGATCACAGTTGTG 7552 || ||| ||| || || || | || |||| ||||| || | ||| ||| || | Sbjct 8420 GAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATC 8479 Query 7553 aaaaaaaTGATTCGAAACTCAAATGGACAAGGATTAAATGATTACAGTAGAATAACTATA 7612 || || ||||| | ||| ||||| ||||||| ||| ||| ||| | || Sbjct 8480 AAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATT 8539 Query 7613 GCAAATCATATTGATTATGAAAAGTGGAATAATCATCAAAGAAAGGAATCAAATAAATAT 7672 || || || || ||||||||||| ||||| ||||| |||||| | || |||| | Sbjct 8540 GCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCT 8599 Query 7673 GTTTTTAAAGTTATGGGGCAATTCTTAGG-TTATCCTAATTTAATTGTCAGAACCCATGA 7731 || || | || |||||| |||| || || ||| | | || || || | || ||| | Sbjct 8600 GTATTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTC-GTACACATCA 8658 Query 7732 GTTTTTTGAAAAAAGT 7747 ||||||| | ||||| Sbjct 8659 GTTTTTTAAGGAAAGT 8674 Score = 125 bits (138), Expect = 6e-25 Identities = 224/324 (69%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 7333 AGAGTTCTTTGAAGAAGTGGATCAAAATGGATTATCTGATGAAGATCTCTTGATTGGATT 7392 ||||||||| | || ||| || |||||||| || | | ||||| || | || ||| | Sbjct 21057 AGAGTTCTTAGCAGGAGTAGACAAAAATGGACTAACCCAGGAAGAACTTGTAATCGGACT 21116 Query 7393 AAAGGCCAAAGAAAGAGAACTGAAAAGGAAAGGTAGAtttttttCTCTAATGACTTGGAG 7452 || || || |||| ||| | |||| || ||||||| || || ||| ||||| Sbjct 21117 AAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGA 21176 Query 7453 ATTGAGAGAATACTTTGTTGCAACTGAATTCCTGATTAAAAAACATTTTGTCCCTCTATT 7512 | | | | |||||||| || |||| || || ||| || | | ||| || || || Sbjct 21177 ACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTT 21236 Query 7513 TGAGGGACTAACTATGGCAGATGATTTGATCACAGTTGTGaaaaaaaTGATTCGAAA--- 7569 | | || ||||||||||||| || ||| |||||| | || ||||||| | || | Sbjct 21237 TAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGA-TAGACAGTT 21295 Query 7570 CTCAAATGGACAAGGATTAAATGATTACAGTAGAATAACTATAGCAAATCATATTGATTA 7629 ||| | | ||||||| | | ||| ||| || || || |||||||| ||||| || Sbjct 21296 CTCTA--GAACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTA 21353 Query 7630 TGAAAAGTGGAATAATCATCAAAG 7653 ||| || |||||||| |||||||| Sbjct 21354 TGAGAAATGGAATAACCATCAAAG 21377 Score = 82.4 bits (90), Expect = 6e-12 Identities = 125/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 8067 TAAAAGGAACAGGAAAATTGGGTCTTATCATAAATAAAAATGAAACAGTCCAGAGTGCAG 8126 || |||||||| ||| | ||||| || || ||| | | ||| || |||| |||| Sbjct 29210 TAGAAGGAACAAAGAAACTTGGTCTAATAATCAATGAGAGTGAGACGATCCAATCAGCAG 29269 Query 8127 ATTATATGAACTATGGGAAAGTTCCCATTTTTCGGGGAATAATCCAAGGATTGAACCCCA 8186 |||| ||||||||||||||||||||| | ||| | |||| |||| ||| | ||| Sbjct 29270 ATTACATGAACTATGGGAAAGTTCCCTTATTTAGAGGAAACATCCTCCCATTAGTCACCA 29329 Query 8187 AAAGATGGTCCAGAGCAAACTTTGTAACTAACGACCAACTACCAACTTTTTCCAACGT 8244 | ||| ||| ||| | || |||||| || || ||| | ||| | ||| | || || Sbjct 29330 AGAGAGTGTCTAGAATGACCTGTGTAACAAATGATCAAATCCCATCCTTTGCAAATGT 29387 >seq283 Length=322283 Score = 95.1 bits (104), Expect = 9e-16 Identities = 261/389 (67%), Gaps = 12/389 (3%) Strand=Plus/Plus Query 7370 GATGAAGATCTCTTGATTGGATTAAAGGCCAAAGAAAGAGAACTGAAAAGGAAAGGTAGA 7429 ||| |||| || | || |||| || | |||||||||||| | | || || || | Sbjct 271936 GATAAAGAACTAATAATATGATTGAAAGGGAAAGAAAGAGAAATCAGAAAGACAG--ACG 271993 Query 7430 tttttttCTCTAATGACTTGGAGATTGAGAGAATACTTTGTTGCAACTGAATTCCTGATT 7489 ||| |||||| || |||||| ||||| ||||| || || || || | || ||| Sbjct 271994 ATTTCTTCTCT-TTGTCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATT 272052 Query 7490 AAAAAACATTTTGTCCCTCTATTTGAGGGACTAACTATGGCAGATGATTTGATCACAGTT 7549 || | | | ||| ||||| || | | | | ||| |||||| ||| ||||| Sbjct 272053 AAGATGGAGTATGTTCCTCTCTTCCA-TGTTTTGCCATGAAAGATGACATGACATCAGTT 272111 Query 7550 GTGaaaaaaaTGATTCGAAACT-CAAATGGACAAGGATTAAATGATTACAGTAGAA--TA 7606 || || ||||||| | || | | | | ||||||||| || || | |||| || | | Sbjct 272112 GTAAAGAAAATGA-TGGACAGTACCATAGGACAAGGACTAGATAACTACA--AGCATGTT 272168 Query 7607 ACTATAGCAAATCATATTGATTATGAAAAGTGGAATAATCATCAAAGAAAGGAATCAAAT 7666 || || || || || ||||| ||||| |||||||| |||||||||| || | ||| Sbjct 272169 GGAATTGCTAACCACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAAT 272228 Query 7667 AAATATGTTTTTAAAGTTATGGGGCAATTCTTAGGTTATCCTAATTTAAT-TGTCAGAAC 7725 ||| || || || || ||||| ||||||| || | ||||| | | | ||| || Sbjct 272229 AAACCAGTGTTCAATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAG-AC 272287 Query 7726 CCATGAGTTTTTTGAAAAAAGTGTCATAT 7754 |||||| || || || |||| | |||| Sbjct 272288 CCATGAATTCTTCCAACAAAGCTTTATAT 272316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38777188129368