Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028235.1 Length=12994 Score E Sequences producing significant alignments: (Bits) Value seq1383 161 8e-36 seq283 138 9e-29 >seq1383 Length=104272 Score = 161 bits (178), Expect = 8e-36 Identities = 590/910 (65%), Gaps = 19/910 (2%) Strand=Plus/Plus Query 8232 ATTGGGTTAAAAGCCAAAGAAAGAGAAATGAAGAGAATTGGGAGAtttttttCATTAATG 8291 || || |||| |||||| ||||||||| | || | || ||||| || || || ||| Sbjct 8312 ATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATG 8371 Query 8292 TCTTGGGAGTTGAGAGAATATTTTGTATATACAGAGTATTTAATAAAGGAGTATTTTGTT 8351 || ||||| | |||||||| ||||| |||||||| | || || || |||| ||| Sbjct 8372 TCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTA 8431 Query 8352 CCATTATTCCATGGCTTGACCATGGCAGATGACCTGCAGGAAGTTATTAAGAAAATGTTG 8411 ||| | ||| | ||||| || ||||| || || || || || ||||| ||| | Sbjct 8432 CCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATA 8491 Query 8412 GAGAATGTAAGTGGACAAGGGTTGGATAATTACGAGTATATATCAATTGCGAATCATATT 8471 || | ||||| || || | | ||| | || ||||||| || || || Sbjct 8492 GATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATC 8551 Query 8472 GATTATGAAAAATGGAACAATCATCAACGATACGAATCTAATTGTCATATTTTTAAAGTT 8531 ||||||||||||||||||||||| ||| |||| || || | | | | || | || Sbjct 8552 GATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTG 8611 Query 8532 ATGGGTCAATGTTTTGGTCTTCC--CAATTTGTTTTTACGTTCTCATGAATTTTTTCAAA 8589 ||||| ||| |||||| | || || || |||| ||| | ||| | |||||| | Sbjct 8612 ATGGGGAAATTTTTTGGATTACCAGCACTT--TTTTCTCGTACACATCAGTTTTTTAAGG 8669 Query 8590 AAAGCCTGATTTATTACAACCAACGACCTGATCTGATGATCCCCTTAGAAGACAGGCTGG 8649 |||| | |||||||||| || |||| || | |||||| | ||| | | Sbjct 8670 AAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGAAACATTAT 8729 Query 8650 AATCTATTGATCCCAGTCAACT-TGTTTGTTGGAATGGTCAAGCT-GGAGGATTGGAAGG 8707 | || | || || | | || ||||||||||| | |||| ||||| | ||||| Sbjct 8730 ACTCGAAGGA----AGGATATTGGGTCTGTTGGAATGGAC-AGCTAGGAGGGCTCGAAGG 8784 Query 8708 ATTGAGGCAAAAGGGTTGGTCAATTGTAAATCTACTTGTTATAGAAAGAGAATCCAAAAT 8767 | | || || | || ||| || |||| || || || |||| ||||||| ||||| Sbjct 8785 ACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAAT 8844 Query 8768 TAGGAATACGTTAGTCAAAATTTTGGCTCAAGGAGACAATCAGACCATCAGCACTTGTTA 8827 | ||||| ||| || | ||||||||||||||||| ||| || | ||| || Sbjct 8845 ACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACTA 8904 Query 8828 TGAGATGGTAAGCACTTTTTCAATTGAGGAAGAGGATTTGGAAATTAATAAGATTG-TTC 8886 | | || || | | || ||| ||| | | | || | || | ||| Sbjct 8905 TAAAATCCCAACCGTTAGAACACCTGAAGAAAAAAAGCCCCTCA-TACAAGGAGCGATTC 8963 Query 8887 AAAACAATAATGCTGTCATGAAAGCAATTCGCAATGGGACTGAAAAACTAGGGTTGTTGA 8946 | |||| ||||| ||||||| ||| | | |||| || | || |||| || | | Sbjct 8964 AGAACACAAATGCCATCATGAATGCAGTAGTCGATGGAACAAAGAAGTTAGGATTAATCA 9023 Query 8947 TTAATGATGATGAAAC--TATGGTCAGTGCCGATTATTTAAATTATGGGAAAGTTCCTAT 9004 | ||| | |||||| || ||| || |||||| | |||||||| ||||| || || Sbjct 9024 TCAATAAACGTGAAACCATACAATCA--GCAGATTATATGAATTATGGCAAAGTACCGAT 9081 Query 9005 ATTTCGTGGAATTATTAGGGGATTAGACTACAAAAGGTG-GGCTAGAGTGAATTTTGGGA 9063 || | |||| ||| | || || ||| ||| ||| | | ||| ||| | || || Sbjct 9082 CTTCCAAGGAAATATCTTGCCGTT-GATTACTAAACGTGTGTCAAGAATGACCTGTGTGA 9140 Query 9064 ATAATGATCAGGTTCCATCACTAGGCTCTTTACTATCATCTGTAGCCACAAATGCCTTGA 9123 ||||||||| | | ||| | | | |||| ||| | ||| | |||||||| |||| Sbjct 9141 CCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATCTACAAATGCATTGA 9200 Query 9124 CAGTCTCACA 9133 | || |||| Sbjct 9201 CGATCGCACA 9210 >seq283 Length=322283 Score = 138 bits (152), Expect = 9e-29 Identities = 254/369 (69%), Gaps = 4/369 (1%) Strand=Plus/Plus Query 8226 CTAATTATTGGGTTAAAAGCCAAAGAAAGAGAAATGAAGAGAATTGGGAGAtttttttCA 8285 ||||| || | || |||| |||||||||||||| ||| | | ||||| || Sbjct 271945 CTAATAATATGATTGAAAGGGAAAGAAAGAGAAAT-CAGAAAGACAGACGATTTCTTCTC 272003 Query 8286 TTAATGTCTTGGGAGTTGAGAGAATATTTTGTATATACAGAGTATTTAATAAAGGAGTAT 8345 || |||||||| ||||| |||||||| ||| ||| |||||| | || ||| | | Sbjct 272004 TT--TGTCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAG 272061 Query 8346 TTTGTTCCATTATTCCATGGCTTGACCATGGCAGATGACCTGCAGGAAGTTATTAAGAAA 8405 | |||||| | ||||||| ||| ||||| ||||||| || |||| | |||||| Sbjct 272062 TATGTTCCTCTCTTCCATGTTTTG-CCATGAAAGATGACATGACATCAGTTGTAAAGAAA 272120 Query 8406 ATGTTGGAGAATGTAAGTGGACAAGGGTTGGATAATTACGAGTATATATCAATTGCGAAT 8465 ||| |||| | | | |||||||| | ||||| ||| || || | |||||| || Sbjct 272121 ATGATGGACAGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAAC 272180 Query 8466 CATATTGATTATGAAAAATGGAACAATCATCAACGATACGAATCTAATTGTCATATTTTT 8525 || || ||||| ||||| ||||| || |||||| || || ||||| | | || Sbjct 272181 CACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTC 272240 Query 8526 AAAGTTATGGGTCAATGTTTTGGTCTTCCCAATTTGTTTTTACGTTCTCATGAATTTTTT 8585 || || |||||| ||| ||||| | | ||| |||| | | | |||||||| || Sbjct 272241 AATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTTC 272300 Query 8586 CAAAAAAGC 8594 ||| ||||| Sbjct 272301 CAACAAAGC 272309 Score = 104 bits (114), Expect = 2e-18 Identities = 148/204 (73%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 8339 GGAGTATTTTGTTCCATTATTCCATGGCTTGACCATGGCAGATGACCTGCAGGAAGTTAT 8398 ||||||| || || | |||||||| |||||||||||||||||| || | |||| | Sbjct 292270 GGAGTAT---GTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGT 292326 Query 8399 TAAGAAAATGTTGGAGAATGTAAGTGGACAAGGGTTGGATAATTACGAGTATATATCAAT 8458 || |||||| ||| | | | |||||||| | | ||| |||||| || | ||| Sbjct 292327 AAA-AAAATGATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAAT 292385 Query 8459 TGCGAATCATATTGATTATGAAAAATGGAACAATCATCA-ACGATACGAATCTAATTGTC 8517 ||| || || || ||||| |||||||||||||||| || | ||| |||||||| | Sbjct 292386 TGCTAACCACATCGATTACGAAAAATGGAACAATCTGCAGAGGAT-TTAATCTAATGAAC 292444 Query 8518 ATATTTTTAAAGTTATGGGTCAAT 8541 | || ||||| |||||||||| Sbjct 292445 CAGTGTTCAAAGTAATGGGTCAAT 292468 Score = 95.1 bits (104), Expect = 1e-15 Identities = 187/272 (69%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 8339 GGAGTATTTTGTTCCATTATTCCATGGCTTGACCATGGCAGATGACCTGCAGGAAGTTAT 8398 ||||||| || || | |||||||| |||||||||||||||||| || |||| | Sbjct 273417 GGAGTAT---GTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGT 273473 Query 8399 TAAGAAAATGTTGGAGAATGTAAGTGGACAAGGGTTGGATAATTACGAGTATATATCAAT 8458 ||||||||| ||| | | | |||||||| | | ||| |||||| | | ||| Sbjct 273474 AAAGAAAATGATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAAT 273533 Query 8459 TGCGAATCATATTGATTATGAAAAATGGA-ACAATCATCA-ACGATACGAATCTAATTGT 8516 ||| || || || ||||| ||||||| || | |||| || | ||| ||||||||| Sbjct 273534 TGCTAACCACATCGATTACGAAAAATAGATAAAATCTGCAGAGGAT-TGAATCTAATGAA 273592 Query 8517 CATATTTTTAAAGTTATGGGTCAATGTTTTGGTCTTCCCAATTTGTTTTTACGTTCTCAT 8576 | | || ||||| |||||||||| ||| | | || |||| | | | || Sbjct 273593 CCAGTGTTCAAAGTAATGGGTCAATCCTTTAGATTGGTTAACCTGTTCTGCCAGACCAAT 273652 Query 8577 GAATTTTTTCAAAAAAGCCTGATTTATTACAA 8608 ||||| || ||| ||||| | || || ||||| Sbjct 273653 GAATTCTTCCAACAAAGCTTTATATACTACAA 273684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41437803379544