Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028239.1 Length=16133 Score E Sequences producing significant alignments: (Bits) Value seq1383 96.9 4e-16 >seq1383 Length=104272 Score = 96.9 bits (106), Expect = 4e-16 Identities = 188/274 (69%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 11285 GTAATTGGTCTTAAGGCTAAAGAGAGGGAATTGAAAGATGCTGGGAGGtttttttCATTA 11344 ||||| || || | || || || | |||| | ||| |||| | ||||| || | Sbjct 21106 GTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTT 21165 Query 11345 ATGAGCTGGGAGCTGAGGGAGTACTTCGTATTTACTGAATACCTAATTAAAGAGCATTTT 11404 ||| ||||| || | ||||||| || | || ||||| ||||| ||||| | | | Sbjct 21166 ATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTAT 21225 Query 11405 GTACCATTATTTAAGGGTCTGACTATGGCTGATGACTTACAAACAGTTATTAAGAAGATG 11464 ||||| | ||||| || | |||||||| || | | |||||||| ||||| ||| Sbjct 21226 GTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATG 21285 Query 11465 ATAGATGTGTCTTCTGGTCAAGGCACTGA--GACATATGAGAATATCACCATTGCAAATA 11522 ||||| ||| | ||||| ||| | ||| || | ||||| || |||||| Sbjct 21286 ATAGACAGTTCTCTAGAACAAGG-ACTCACTGAC-TACTCCCAGATCACAATCGCAAATC 21343 Query 11523 ACATAGATTATGAGAAATGGAATAATTATCAAAG 11556 |||| || ||||||||||||||||| ||||||| Sbjct 21344 ACATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 87.8 bits (96), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 11507 ATCACCATTGCAAATAACATAGATTATGAGAAATGGAATAATTATCAAAGGTATGAATCT 11566 ||||| || || || ||||||||||||||||||||||||| ||||||| || || || Sbjct 7419 ATCACAATCGCCAACCACATAGATTATGAGAAATGGAATAACCATCAAAGATACGAGTCC 7360 Query 11567 AATCATGCAATATTCACAGTGATGGGGCAATTTTT 11601 | | | || ||||||| ||||||||| ||||||| Sbjct 7359 ACTGAGCCAGTATTCACTGTGATGGGG-AATTTTT 7326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 51471712842976