Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028241.1 Length=14478 Score E Sequences producing significant alignments: (Bits) Value seq1383 185 8e-43 >seq1383 Length=104272 Score = 185 bits (204), Expect = 8e-43 Identities = 417/614 (68%), Gaps = 22/614 (4%) Strand=Plus/Plus Query 9632 TGGTAATTGGCCTTAAAGGGAAAGAGAGGGAATTGAAAGAAGCCGGACGATTCTTTTCCT 9691 ||||||| || | | || || || || ||| | ||| | ||| ||||||| || | Sbjct 8307 TGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTT 8366 Query 9692 TAATGTCCTGGGAATTAAGGGAATATTTCGTTGTAACTGAATTACTGATTAAACAACATT 9751 | ||||| |||||| | || ||||| || || | || || | ||||| ||| || ||| Sbjct 8367 TGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATT 8426 Query 9752 ATGTAAAGTTGTTCAAAGGTTTGACCATGGCAGATGATCTCCAAACTGTCATAAAGAAAA 9811 ||||| | |||||||| || || ||||| || | | || || || ||||| | Sbjct 8427 ATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGA 8486 Query 9812 TGCTTGATACCTCACATGGTCAGGGA--ACCCGTACATATGATGCCA--TCACCATTGCC 9867 || | |||| ||| | || |||||| | | | || | | ||| || | |||||| Sbjct 8487 TGATAGATAGCTCCCTGGGACAGGGATTAACTG-AC---TACTCCCAAATCGCAATTGCC 8542 Query 9868 AATAACATAGACTATGAAAAATGGAATAATTATCAGAGAATGGAATCAAACGGTCCTGTA 9927 || |||| || |||||||||||||| ||| | || ||| || |||| | |||||| Sbjct 8543 AACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTA 8602 Query 9928 TTCAGAGTAATGGGTCAATTCTTGGGA-TATCCTAATTTGATACTCAGGACCCATGAGTT 9986 |||| || ||||| |||| || ||| || | | || | ||| | || ||| |||| Sbjct 8603 TTCACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTTTCTC-GTACACATCAGTT 8661 Query 9987 TTTTCAGAAAAGTTTAATTTATTATAATCAAAGACCTGATTTGATGA-GAGTAGTTGGGA 10045 |||| || |||||||| ||||||| ||| ||||||| || || |||| ||| | | || Sbjct 8662 TTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGA 8721 Query 10046 AAAGTGCTATGAACAGTACTAAACATAT--CGTGTGCTGGGAAGGGCAGCTGGGTGGTTT 10103 || | ||| | | | || |||| || || ||| | || ||||| || || | Sbjct 8722 AACAT--TAT-ACTCGAAGGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCT 8778 Query 10104 AGAAGGGCTGAGACAAAAGGGGTGGAGTGTTGTCAATTATTTAATGATTGAACGAGAATC 10163 ||||| || ||||| | ||||||||| | | || || | | || |||||| Sbjct 8779 CGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATG 8838 Query 10164 TAAAGTAAGAAACACCTTAGTGAAAGTGTTGGCTCAGGGAGACAACCAAACGATTACA-- 10221 |||| || | || ||| |||||| |||||||| ||||||||||| | ||| | Sbjct 8839 TAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCA---GGTTATATG 8895 Query 10222 -ACCCACTATAAAA 10234 || |||||||||| Sbjct 8896 TACTCACTATAAAA 8909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46179361652921