Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_028246.1 Length=14627 Score E Sequences producing significant alignments: (Bits) Value seq1383 163 3e-36 >seq1383 Length=104272 Score = 163 bits (180), Expect = 3e-36 Identities = 619/957 (65%), Gaps = 26/957 (3%) Strand=Plus/Plus Query 9705 CCTGAATTTTTAAAAGAAATTAATGATCACGGTTTGGAGTGGGAAAAACTGGTAATAGGA 9764 |||| |||| | || | || | ||| | || |||| | ||| | |||||||| ||| Sbjct 8258 CCTGTATTTCTCAAGAAGATCAGTGAGGAAGGATTGGGTAGAGAAGAGCTGGTAATCGGA 8317 Query 9765 CTAAAAGCTAAAGAGAGAGAATTAAAGATAGAAGGTAGAtttttttCATTGATGTCATAT 9824 ||| ||| || || |||||| |||| || || ||||| || || |||||||| | Sbjct 8318 TTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGG 8377 Query 9825 GACATGAGGGATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTA 9884 || | || || ||||| || || || || || |||| ||| |||||||||||||| | Sbjct 8378 GAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGTACCACTT 8437 Query 9885 TTCAAAGGATTGACCATGGCTGATGATCAAAAT----ACAGTAGTAAAGAAAATGCTCAA 9940 |||||||| || || ||||| || ||| || || || | ||||| ||| | | Sbjct 8438 TTCAAAGGCTTAACAATGGCGGA----CAACATGACCACCGTGATCAAGAAGATGATAGA 8493 Query 9941 AGTTTCTAAAGGTCAAGGGCTAACAGATTATAAAGAGATAACATTTGCTAATCACTTGGA 10000 || || || || |||| || || | || || |||| || ||| | || Sbjct 8494 TAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGA 8553 Query 10001 TTATGAGAAGTGGAATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTCAGAGTAAT 10060 |||||| || ||||| ||| | ||||| || |||| | || || |||| || || Sbjct 8554 TTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTGAT 8613 Query 10061 GGGCCAGTTTTTAGGTCTACC-TCACTTAATAGAAAGAACTCACGAGTTCTTTGAAAATA 10119 ||| | ||||| || |||| ||||| | | || || |||| ||| | | | Sbjct 8614 GGGGAAATTTTTTGGATTACCAGCACTT-TTTTCTCGTACACATCAGTTTTTTAAGGAAA 8672 Query 10120 GTCTAATTTATTACAATGGCCGACCTGATTTAATG-TATGTCAGAAATAAAGTTGTACAC 10178 || || |||||||||||| |||| || |||||| | || | | ||| | || || Sbjct 8673 GTTTAGTTTATTACAATGAAAGACCCGACTTAATGATCAGTGATGGAGAAACAT-TATAC 8731 Query 10179 TCCAAAGGTGATGACAT--CGTTTGCTGGGAAGGACAAAAAGGAGGATTAGAGGGTCTAA 10236 || || | | || || || || ||| | ||||| |||||| | || || || | Sbjct 8732 TCGAA--GGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCTCGAAGGACTCA 8789 Query 10237 GACAAAAAGGATGGAGTGTCCTTAATTGCCTAATGATTGAGAGAGAATCAAAGATTCGGA 10296 |||| | || |||||| | | || |||| | | |||||||||| || || || | Sbjct 8790 GACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAATGTAAAATACGTA 8849 Query 10297 ACACCCAAATCGGCTTATTGGCCCAGGGAGACAACCAAGTAATCACAACACATTATAAAG 10356 | |||| | | | |||||| || ||||||||||| || || || || |||||| Sbjct 8850 ATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTACTCACTATAAAA 8909 Query 10357 T-TGAGCCATATCAAAATGACAATGAATTAATCTTCCACAT-CAATAATATTATATCGAA 10414 | | || | || | || ||| || || ||| ||| | || ||| Sbjct 8910 TCCCAACCGTTAGAACACCTGAA-GAAAAAAAGCCCCTCATACAAGGA-GCGATTCAGAA 8967 Query 10415 TAATAATCGTATAATGGATGCAATAATAGAAGGAACAGAAAAGTTGGGCTTAAAAATAAA 10474 | ||| || ||| ||||| || | || |||||| | ||||| || |||| || || Sbjct 8968 CACAAATGCCATCATGAATGCAGTAGTCGATGGAACAAAGAAGTTAGGATTAATCATCAA 9027 Query 10475 CATGGATGAGACAATTCAGAGTGCAGATTATATTAACTATGGGAAAGTTCCGATATATAG 10534 | ||| || || || ||||||||||| || ||||| ||||| ||||| | Sbjct 9028 TAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGCAAAGTACCGATCTTCCA 9087 Query 10535 AGGGAATATTCTGGGTTTAAATCAGAAGCGGTGGTCAAGAGTAAATTATGTGAGTAATGA 10594 ||| ||||| || || | | || || ||||||| | | | ||||| ||||| Sbjct 9088 AGGAAATATCTTGCCGTTGATTACTAAACGTGTGTCAAGAATGACCTGTGTGACCAATGA 9147 Query 10595 TCAGTTGCCATCATGCAGCAGTATACTAAACTCTGC---ATCTACTAATGCATTAAC 10648 |||| | | |||| | | |||| ||| || |||||| |||||||| || Sbjct 9148 TCAGATCCATTCATTTGAAAATGTACT---CTCAGCAGTATCTACAAATGCATTGAC 9201 Score = 125 bits (138), Expect = 7e-25 Identities = 197/282 (70%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 9746 GGAAAAACTGGTAATAGGACTAAAAGCTAAAGAGAGAGAATTAAAGATAGAAGGTAGAtt 9805 |||| |||| ||||| ||||||| ||| || || | ||| | || ||| || |||| Sbjct 21096 GGAAGAACTTGTAATCGGACTAAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATT 21155 Query 9806 tttttCATTGATGTCATATGACATGAGGGATTACTTCGTAATGACTGAATATTTGATaaa 9865 ||| || | ||||| | || | | | ||||| || || || |||||| | || || Sbjct 21156 TTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAA 21215 Query 9866 aaaaTATTATGTACCATTATTCAAAGGATTGACCATGGCTGATGATCAAAATACAGTAGT 9925 | |||| |||||||| | || ||||| || || ||||| || || | |||||| | Sbjct 21216 AGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAGTTAT 21275 Query 9926 AAAGAAAATGCTCAAAGTTTCTAAAGGTCAAGGGCTAACAGATTATAAAGAGATAACATT 9985 |||||||||| | | |||| || ||||| || || || || |||| ||| | Sbjct 21276 AAAGAAAATGATAGACAGTTCTCTAGAACAAGGACTCACTGACTACTCCCAGATCACAAT 21335 Query 9986 TGCTAATCACTTGGATTATGAGAAGTGGAATAATTATCAAAG 10027 || |||||| | || |||||||| |||||||| ||||||| Sbjct 21336 CGCAAATCACATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 78.8 bits (86), Expect = 9e-11 Identities = 166/248 (67%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 9780 AGAGAATTAAAGATAGAAGGTAGAtttttttCATTGATGTCATATGACATGAGGGATTAC 9839 |||||| | || ||| || ||||||| || | | ||| | || | | || ||| Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 9840 TTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCAAAGGATTGACC 9899 || || || || |||||| | || ||| |||| |||||||| | || ||||| || || Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 9900 ATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAAGTTTCTAAAGGTCAAGGG 9959 ||||| || || | || || | ||||||||| | | ||| || ||| | Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 9960 CTAACAGATTATAAAGAGATAACATTTGCTAATCACTTGGATTATGAGAAGTGGAATAAT 10019 || || || ||| | | || ||| | || || || | || |||||||||||||| || Sbjct 38093 CTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAAC 38152 Query 10020 TATCAAAG 10027 ||||||| Sbjct 38153 CATCAAAG 38160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46655833149790