Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031215.1 Length=12291 Score E Sequences producing significant alignments: (Bits) Value seq1383 206 2e-49 seq283 129 5e-26 >seq1383 Length=104272 Score = 206 bits (228), Expect = 2e-49 Identities = 611/923 (66%), Gaps = 33/923 (4%) Strand=Plus/Plus Query 7312 CTGATTATCGGGTTGAAAGAGAAGGAGAGAGAGATCAAAATTAACGGTCGTTTTTTCTCT 7371 ||| | ||||| || | || ||||| ||||| | ||||| || | || |||||| Sbjct 8306 CTGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCT 8365 Query 7372 CTGATGTCATGGGATTTGAGAGATTACTTTGTGATAACTGAATATCTAATCAAGACACAT 7431 ||||||| ||||| | ||||| |||||||| || || || || || ||||| | || Sbjct 8366 TTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATAT 8425 Query 7432 TTTGTCCCTCTTTTCTATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAAG 7491 | ||| || |||||| | || |||| ||||| || | ||||| ||||| | | |||| Sbjct 8426 TATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAG 8485 Query 7492 ATGATGGAGAATACTAGCGGTCAGGGCTCTGATGATTATGAACACATCGGAATTGCAAAC 7551 ||||| || | | || ||||| | ||| || || |||| |||||| ||| Sbjct 8486 ATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAAC 8545 Query 7552 CACCTTGATTACGAAAAATGGAACAACCATCAGAGATATCAGTCCACTGAGCCGGTATTT 7611 ||| | ||||| |||||||||||||| || || |||||| | || || | || ||||| Sbjct 8546 CACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTC 8605 Query 7612 ACGGTGAT-GGGAAAGTTTTTGGGTTATCCTAATTTGATTGCCAGGACCCATGAGTTCTT 7670 || ||||| |||||| ||||||| ||| | | || || | | || ||| |||| || Sbjct 8606 ACTGTGATGGGGAAATTTTTTGGATTACCAGCACTT-TTTTCTCGTACACATCAGTTTTT 8664 Query 7671 TGAAAAGAGTTTTATCTATCACGGAGGCAGAGCAGATTTAATGAAAGTTGTTAATGGATC 7730 | | | ||||| | ||| || | ||| | || ||||||| | | ||||| Sbjct 8665 TAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGA---TCAGTGATGGAGA 8721 Query 7731 GATTGTAAATAAGGACCCTGAAAGGAT----GGTTTGTTGGCAGGGTCAAAAAGGTGGGC 7786 | || | | | | |||||| ||| |||||| | || || ||| |||| Sbjct 8722 AACATTATACTCGAA----GGAAGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGC 8777 Query 7787 TAGAAGGACTGAGACAGAAAGGGTGGAGTATCCTGAACTTGCTGGTGATAAGAAGAGAAG 7846 | |||||||| |||||| | ||||||||||| | ||| | || || || |||||| Sbjct 8778 TCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGTACTAGAGAGAGAAT 8837 Query 7847 GTCAAGATA-GAAATACAAAAATTCGCTGCCTCGCCCAAGGAGATAATCAGGTCATATGC 7905 || || ||| | ||||| | | | | || |||||||| || ||||| ||||| Sbjct 8838 GT-AAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGT 8896 Query 7906 ACACAATACAAATTACAAAAGTATAGGACAGATGAGGAGTTACAAGACAAT-AT-CAAGA 7963 || || || ||| | | || ||| ||| ||| || | ||| | | || |||| Sbjct 8897 ACTCACTATAAAATCCCAACCGTTAGAACACCTGAAGA-AAAAAAGCCCCTCATACAAG- 8954 Query 7964 ACATTGTCTCA-AACAATCAATAT---ATATTGAAAAGAATTGAAGAAGGCACCAAGAAG 8019 | | ||| |||| ||| || || |||| | | | || || || |||||| Sbjct 8955 -GAGCGATTCAGAACA--CAA-ATGCCATCATGAATGCAGTAGTCGATGGAACAAAGAAG 9010 Query 8020 ATCGGCTTAAGGATCAACCAAGACGAAACGATGCAGAGTGCGGACTATCTCAATTATGGT 8079 | || |||| ||||| || ||||| || || || || ||| | |||||||| Sbjct 9011 TTAGGATTAATCATCAATAAACGTGAAACCATACAATCAGCAGATTATATGAATTATGGC 9070 Query 8080 AAAGTTCCCATTTTCCGAGGAAATATGAGAAATTTAGAGATAA--AAAGGTG-GGCTAGG 8136 ||||| || || |||| ||||||||| || ||| | ||| ||| | | || Sbjct 9071 AAAGTACCGATCTTCCAAGGAAATATCTTGCCGTT---GATTACTAAACGTGTGTCAAGA 9127 Query 8137 GTCACATGTGTTACCAACGATCAAGTCCCTACCTTAGCAAACACAATGTCAACTGTGTCA 8196 | || ||||| ||||| ||||| ||| | | || | ||| | | ||| | || || Sbjct 9128 ATGACCTGTGTGACCAATGATCAGATCCATTCATTTGAAAATGTACTCTCAGCAGTATCT 9187 Query 8197 ACAAATGCACTAACTGTCGCACA 8219 ||||||||| | || ||||||| Sbjct 9188 ACAAATGCATTGACGATCGCACA 9210 Score = 113 bits (124), Expect = 4e-21 Identities = 176/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 7339 AGAGAGATCAAAATTAACGGTCGTTTTTTCTCTCTGATGTCATGGGATTTGAGAGATTAC 7398 ||||| ||||||| || || |||||||| || | ||| ||||| | | || ||| Sbjct 37913 AGAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTAC 37972 Query 7399 TTTGTGATAACTGAATATCTAATCAAGACACATTTTGTCCCTCTTTTCTATGGTCTAACT 7458 |||||||| || |||||||||||||| | | | ||| || || || | || ||||| Sbjct 37973 TTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACT 38032 Query 7459 ATGGCCGATGATATGACGACCGTTGTGAGGAAGATGATGGAGAATACTAGCGGTCAGGGC 7518 |||||||| ||||||| || || | | ||| ||||| || | || || || || Sbjct 38033 ATGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGC 38092 Query 7519 TCTGA-TGATTATGAACACATCGGAATTGCAAACCACCTTGATTACGAAAAATGGAACAA 7577 || | || ||| ||| ||| ||| |||||||| | || || || || |||||||| Sbjct 38093 -CTCACGGACTATTCACAAATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAA 38151 Query 7578 CCATCAGAG 7586 |||||| || Sbjct 38152 CCATCAAAG 38160 Score = 111 bits (122), Expect = 1e-20 Identities = 184/262 (70%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 7328 AAGAG--AAGGAGAGAGAGATCAAAATTAACGGTCGTTTTTTCTCTCTGATGTCATGGGA 7385 ||||| ||||| | || ||||||| || || |||||||| || ||||| ||||| Sbjct 21117 AAGAGCAAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGA 21176 Query 7386 TTTGAGAGATTACTTTGTGATAACTGAATATCTAATCAAGACACATTTTGTCCCTCTTTT 7445 | | | ||||||||||| || |||||||||||||| | | | ||| || || || Sbjct 21177 ACTACGTAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTT 21236 Query 7446 CTATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAAGATGATGGAGAATAC 7505 | || |||||||||| || ||||||| || ||| | | ||| ||||| || | | | Sbjct 21237 TAAAGGGTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTC 21296 Query 7506 TAGCGGTC-AGGGCTCTGATGATTATGAACACATCGGAATTGCAAACCACCTTGATTACG 7564 | | | ||| ||| ||| || || ||| ||| ||||| ||| |||| || | Sbjct 21297 TCTAGAACAAGGACTC-ACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATG 21355 Query 7565 AAAAATGGAACAACCATCAGAG 7586 | |||||||| |||||||| || Sbjct 21356 AGAAATGGAATAACCATCAAAG 21377 Score = 96.9 bits (106), Expect = 3e-16 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 7536 CATCGGAATTGCAAACCACCTTGATTACGAAAAATGGAACAACCATCAGAGATATCAGTC 7595 |||| ||| || |||||| | ||||| || |||||||| |||||||| ||||| |||| Sbjct 7420 CATCACAATCGCCAACCACATAGATTATGAGAAATGGAATAACCATCAAAGATACGAGTC 7361 Query 7596 CACTGAGCCGGTATTTACGGTGATGGGAAAGTTTTT 7631 ||||||||| ||||| || |||||||| || ||||| Sbjct 7360 CACTGAGCCAGTATTCACTGTGATGGGGAATTTTTT 7325 >seq283 Length=322283 Score = 129 bits (142), Expect = 5e-26 Identities = 251/363 (69%), Gaps = 6/363 (2%) Strand=Plus/Plus Query 7324 TTGAAAGAGAAGGAGAGAGAGATCAAAATTAACGGTCGTTTTTTCTCTCTGATGTCATGG 7383 ||||||| ||| || ||||| |||| || | | | || ||| | ||||| |||| ||| Sbjct 271957 TTGAAAGGGAAAGAAAGAGAAATCAGAAAGA-CAGACGATTTCT-TCTCTT-TGTCTTGG 272013 Query 7384 GATTTGAGAGATTACTTTGTGATAACTGAATATCTAATCAAGACACATTTTGTCCCTCTT 7443 ||||| || || || || || || || ||||| || |||| | | ||| ||||| Sbjct 272014 ACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTATGTTCCTCTC 272073 Query 7444 TTCTATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAAGATGATGGAGAAT 7503 ||| ||| | | | ||| ||||| ||||| | ||||| | ||| |||||||| | | Sbjct 272074 TTCCATGTTTTGCC-ATGAAAGATGACATGACATCAGTTGTAAAGAAAATGATGGACAGT 272132 Query 7504 ACTAGCGGTCAGGGCTCTGATGATTATGAACACATCGGAATTGCAAACCACCTTGATTAC 7563 || | || || || ||| | || | || | |||||||| |||||| | |||||| Sbjct 272133 ACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCACATCGATTAC 272192 Query 7564 GAAAAATGGAACAACCATCAGAGATATCAGTCCACTGAGCCGGTATTTACGGTGATGGGA 7623 ||||| ||||| || ||||| ||| | | | | | | || || || | || ||||| Sbjct 272193 GAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAATGTAATGGGT 272252 Query 7624 AAGTTTTTGGGTTATCCTAATTTGAT-TGCCAGGACCCATGAGTTCTTTGAAAAGAGTTT 7682 || || || || | ||||| || | | ||| ||||||||| ||||| || | || || Sbjct 272253 AAATTCTTTGGATTGGCTAATCTGTTCTACCA-GACCCATGAATTCTTCCAACAAAGCTT 272311 Query 7683 TAT 7685 ||| Sbjct 272312 TAT 272314 Score = 91.5 bits (100), Expect = 1e-14 Identities = 175/255 (69%), Gaps = 5/255 (2%) Strand=Plus/Plus Query 7434 TGTCCCTCTTTTCTATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAAGAT 7493 ||||||||| ||| ||||| | || ||||| ||||| |||| | ||||| | || || Sbjct 292276 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAAAAA-AT 292334 Query 7494 GATGGAGAATACTAGCGGTCAGGGCTCTGATGATTATGAACACATCGGAATTGCAAACCA 7553 ||||| | ||| | || || || | | | || || || | |||||||| ||||| Sbjct 292335 GATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAACCA 292394 Query 7554 CCTTGATTACGAAAAATGGAACAACCATCAGAGATATCAGTCCACTGAGCCGGTATTTAC 7613 | | |||||||||||||||||||| | ||||| | | || | ||| || || || | Sbjct 292395 CATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTCAA 292454 Query 7614 GGTGATGGGAAAGTTTTTGGGTTATCCTAATTTGATTGCCAGGACCCATGAGTTCTTTGA 7673 || ||||| | | || | | ||||| ||||| |||| |||| ||||| | Sbjct 292455 AGTAATGGGTCAATCCTTTAGATTGGTTAATT---CTGCCA-GACCAATGAATTCTTCCA 292510 Query 7674 AAAGAGTTTTATCTA 7688 | | || ||||| || Sbjct 292511 ACAAAGCTTTATATA 292525 Score = 89.7 bits (98), Expect = 4e-14 Identities = 179/261 (69%), Gaps = 11/261 (4%) Strand=Plus/Plus Query 7434 TGTCCCTCTTTTCTATGGTCTAACTATGGCCGATGATATGACGACCGTTGTGAGGAAGAT 7493 ||||||||| ||| ||||| | || ||||| ||||| ||||| | ||||| | ||| || Sbjct 273423 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAAAT 273482 Query 7494 GATGGAGAATACTAGCGGTCAGGGCTCTGATGATTATGAACACATCGGAATTGCAAACCA 7553 ||||| | ||| | || || || | | | || || || | |||||||| ||||| Sbjct 273483 GATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAACCA 273542 Query 7554 CCTTGATTACGAAAAATGGA-ACAACCATCAGAGATATCAGTCCACTGAGCCGGTATTTA 7612 | | ||||||||||||| || | || | ||||| | | || | ||| || || || | Sbjct 273543 CATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTTCA 273602 Query 7613 CGGTGATGGG--AAAGTTTT---TGGGTTATCCTAATTTGATTGCCAGGACCCATGAGTT 7667 || ||||| || ||| | ||||| ||| | ||||| |||| |||| || Sbjct 273603 AAGTAATGGGTCAATCCTTTAGATTGGTTAACCTGTT----CTGCCA-GACCAATGAATT 273657 Query 7668 CTTTGAAAAGAGTTTTATCTA 7688 ||| || | || ||||| || Sbjct 273658 CTTCCAACAAAGCTTTATATA 273678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39189711407340