Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031236.1 Length=11165 Score E Sequences producing significant alignments: (Bits) Value seq1383 145 5e-31 >seq1383 Length=104272 Score = 145 bits (160), Expect = 5e-31 Identities = 269/391 (69%), Gaps = 3/391 (1%) Strand=Plus/Plus Query 6251 TTAAG-GCGAAAGAGAGGGAACTAAAAGCACAGGGAAGATTCTTCTCCCTGCTTTCTTGG 6309 ||||| || || || || ||| ||||| ||||||||||||||| || | || ||| Sbjct 8318 TTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTTTGATGTCGTGG 8377 Query 6310 GTACTTAGAGAGTATTTTGTCGTAACGGAATATCTTAT-AAAGATCCATTTCCTCCCTCT 6368 | ||| ||||| || |||||| | || || || || || ||||| ||| | || || Sbjct 8378 GAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGA-ATATTATGTACCACT 8436 Query 6369 TTTTAAGGGACTGACTATGGCTGATGACTTGACTACCCTCACCAAGAAGATGCTGGACAC 6428 ||| || || | || ||||| || || |||| ||| | | |||||||||| | || | Sbjct 8437 TTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGATAGATAG 8496 Query 6429 CTCCTCGGGTCAAGGGTTAAGTGGATACGACAAAATTAGTTATGCTAACCATTTGGATTA 6488 |||| ||| || || |||| || ||| | |||| ||| ||||| | ||||| Sbjct 8497 CTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACATCGATTA 8556 Query 6489 TGAGAAGTGGAACAATTATCAAAGGATTGAGTCCAACGGACCGGTCTTCAAAGTCATGGG 6548 ||| || ||||||||| | ||||| ||| || | | || || |||| || ||||| Sbjct 8557 TGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGTGATGGG 8616 Query 6549 ACAGTTTCTGGGGTATCCAAATCTTATATATCGAACACATGAGTTCTTCCAGAAAAGCAT 6608 | ||| | || | ||| ||| | | ||| |||||| |||| || || |||| | Sbjct 8617 GAAATTTTTTGGATTACCAGCACTTTTTTCTCGTACACATCAGTTTTTTAAGGAAAGTTT 8676 Query 6609 CATTTACTACAATGATAGGCCGGATTTGATG 6639 |||| |||||||| || || || || ||| Sbjct 8677 AGTTTATTACAATGAAAGACCCGACTTAATG 8707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35588926825972