Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031273.1 Length=11280 Score E Sequences producing significant alignments: (Bits) Value seq1383 109 4e-20 >seq1383 Length=104272 Score = 109 bits (120), Expect = 4e-20 Identities = 232/340 (68%), Gaps = 5/340 (1%) Strand=Plus/Plus Query 5755 TGATAATCGGATTAAAGCCCAAAGAGAGAGAAGTGAAAAGCGAGGGAAGATTCTTCGCCT 5814 || |||||||||||| |||| || |||||||| |||| | ||||||||||||| | | Sbjct 8307 TGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTT 8366 Query 5815 TGATGTCTTGGAAGTTAAGAGAGTATTTTGTGATAACGGAATACCTAATCAAGAAGTTTT 5874 ||||||| ||| | | ||||| || ||||| || || || ||||| ||||| | | || Sbjct 8367 TGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATT 8426 Query 5875 ACTTGCCTCTATTTGGAGCCCTAACTATGGCCGACGACTATG-TGACTGTCGTGAAAAAG 5933 | | || || || || | |||| ||||| ||| || ||| || || | || ||| Sbjct 8427 ATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAAC-ATGACCACCGTGATCAAGAAG 8485 Query 5934 TTGCTTTCTTCCTCCTCTGGTCAAGGACTGTCCGATTATTCTCAAGTCAACTACT-CGAA 5992 || | | |||| || || ||| | | || || || ||| || | | | | || Sbjct 8486 ATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATC-GCAATTGCCAA 8544 Query 5993 TCACCTCGACTATTCTGCGTGGAACAACCACCAGAGGAAGGAAGCCACAGACCCGGTCTT 6052 ||| |||| ||| |||||||| ||||| || | || | |||| ||| || || Sbjct 8545 CCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATT 8604 Query 6053 TCGAGTGATGGGCGAATTCTTCGGACTACC-GAACCTTTT 6091 |||||||| |||| || ||| |||| | || |||| Sbjct 8605 CACTGTGATGGGGAAATTTTTTGGATTACCAGCACTTTTT 8644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35956680135792