Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031278.1 Length=12247 Score E Sequences producing significant alignments: (Bits) Value seq1383 196 4e-46 seq283 149 5e-32 >seq1383 Length=104272 Score = 196 bits (216), Expect = 4e-46 Identities = 415/611 (68%), Gaps = 15/611 (2%) Strand=Plus/Plus Query 7300 TGATAATAGGCTTAAGAGAGAAAGAAAGAGAAATCAAGATCAATGGCCGATTCTTTTCTC 7359 || |||| || ||||||| || ||||||||| | || ||| || ||||||| ||| Sbjct 8307 TGGTAATCGGATTAAGAGCCAAGGAAAGAGAAGTAAAAATCTCGGGAAGATTCTTCTCTT 8366 Query 7360 TGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGATTAAAACCCATT 7419 ||||||| ||||| | |||| || ||||| || || ||||| ||||| ||| ||| Sbjct 8367 TGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATT 8426 Query 7420 TTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAGTAGTACGCAAGA 7479 ||| || || || | || | |||||||| || | ||||| || || | |||| Sbjct 8427 ATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGA 8486 Query 7480 TGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAGGAATTGCCAATC 7539 |||| || | | || |||||||| | ||| || || || | ||||||||| | Sbjct 8487 TGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACC 8546 Query 7540 ACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAGAACCTGTATTCA 7599 || | ||||||||||| ||||| |||||||||||||| | || |||| |||||||||| Sbjct 8547 ACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCA 8606 Query 7600 CAGTCATGGGCAAATTCCTCGGA-TATCCGAATTTAATTGCGAGAACTCATGAGTTCTTC 7658 | || ||||| ||||| | ||| || | | | || || | | || ||| |||| || Sbjct 8607 CTGTGATGGGGAAATTTTTTGGATTACCAGCACTT-TTTTCTCGTACACATCAGTTTTTT 8665 Query 7659 GAGAAAAGCTTCATTTACCACGGCGGTAGAGCAGACTTAATGAAGATCTCCAACGGCAAC 7718 || |||| || |||| || | ||| | |||||||| |||| | || | Sbjct 8666 AAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAAT---GATCAGTGATGGAGAA 8722 Query 7719 ATAGTTAAC---AAGGATCCCAGTA-AGATGGTATGCTGGCAGGGCCAGAAGGGCGGATT 7774 | | | || ||||| || | | ||| || ||| | || ||| || || | Sbjct 8723 ACATTATACTCGAAGGA----AGGATATTGGGTCTGTTGGAATGGACAGCTAGGAGGGCT 8778 Query 7775 GGAAGGACTTCGACAAAAGGGGTGGAGCATATTGAATCTATTAGTCATTCGA-AGGGAAG 7833 |||||||| |||| | |||||||| ||||| || || |||| | | || || ||| Sbjct 8779 CGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTAGT-ACTAGAGAGAGAAT 8837 Query 7834 GACAAGACCGGAACACCCGAATCCGATGCTTAGCTCAAGGAGATAATCAGGTTATCTGTA 7893 | || || || |||||| | || ||||||||||| || |||||||| |||| Sbjct 8838 GTAAAATACGTAATACCCGAGTGAACACATTGGCTCAAGGAGACAACCAGGTTATATGTA 8897 Query 7894 CACAATATAAA 7904 | || |||||| Sbjct 8898 CTCACTATAAA 8908 >seq283 Length=322283 Score = 149 bits (164), Expect = 5e-32 Identities = 261/372 (70%), Gaps = 6/372 (2%) Strand=Plus/Plus Query 7302 ATAATAGGCTTAAGAGAGAAAGAAAGAGAAATCAAGATCAATGGCCGATTCTTTTCTCTG 7361 |||||| | || | || |||||||||||||||| ||| | | ||||| | |||||| Sbjct 271948 ATAATATGATTGAAAGGGAAAGAAAGAGAAATC-AGAAAGACAGACGATT-TCTTCTCT- 272004 Query 7362 ATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGATTAAAACCCATTTT 7421 |||| ||| || | || ||||| || || || |||||||| ||||| | | | | Sbjct 272005 TTGTCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGTAT 272064 Query 7422 GTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAGTAGTACGCAAGATG 7481 ||||| ||||| ||| || | ||| ||||| |||||| |||| ||| || ||| Sbjct 272065 GTTCCTCTCTTCCATGTTTTG-CCATGAAAGATGACATGACATCAGTTGTAAAGAAAATG 272123 Query 7482 ATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAGGAATTGCCAATCAC 7541 ||||| | |||| ||||| || ||| | || |||| | |||||||| || ||| Sbjct 272124 ATGGACAGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACCAC 272183 Query 7542 TTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAGAACCTGTATTCACA 7601 | ||||| ||||| |||||||| || |||||| || ||| |||| || |||| Sbjct 272184 ATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCAAT 272243 Query 7602 GTCATGGGCAAATTCCTCGGATATCCGAATTTAAT-TGCGAGAACTCATGAGTTCTTCGA 7660 || ||||| |||||| | |||| | ||| | | | | || || ||||| |||||| | Sbjct 272244 GTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAG-ACCCATGAATTCTTCCA 272302 Query 7661 GAAAAGCTTCAT 7672 ||||||| || Sbjct 272303 ACAAAGCTTTAT 272314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39049005793148