Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031282.1 Length=12651 Score E Sequences producing significant alignments: (Bits) Value seq1383 159 3e-35 seq283 134 1e-27 >seq1383 Length=104272 Score = 159 bits (176), Expect = 3e-35 Identities = 355/524 (68%), Gaps = 28/524 (5%) Strand=Plus/Plus Query 7747 ATTGGATTAAAGGAGAAAGAGCGAGAAATCAAGAAAGACGGGA-GATTCTTCTCTCTTAT 7805 || ||||||| | || || ||||| | || || ||||| ||||||||||| | || Sbjct 8312 ATCGGATTAAGAGCCAAGGAAAGAGAAGTAAA-AATCTCGGGAAGATTCTTCTCTTTGAT 8370 Query 7806 GTCGTGGCAACTCAGGGATTACTTTGTAATAACCGAATATTTGATCAAGCAACACTTTGT 7865 ||||||| ||||||| || |||||||| || || || || ||||||| || | | ||| Sbjct 8371 GTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATCAAAGAATATTATGT 8430 Query 7866 CCCATTATTCGACGGTTTGACTATGGCAGATGATCTCACGACTGTTATCAAGAAAATGAT 7925 ||| | ||| | || || || ||||| || | | || || || |||||||| ||||| Sbjct 8431 ACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTGATCAAGAAGATGAT 8490 Query 7926 GGACAACGCAAATGGTCAAGGATTAGATACCTATGATTATATATCCATAGCCAATCATAT 7985 || | | | || || |||||| | ||| | || | || ||||| || || Sbjct 8491 AGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCAATTGCCAACCACAT 8550 Query 7986 AGATTATGAAAAGTGGAATAATCATCAGAGGAAAGAATCCACTACCCCAGTATTTAAGGT 8045 ||||||||||| ||||| ||||| || || | || || || |||| ||||| | || Sbjct 8551 CGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCCCCTGTATTCACTGT 8610 Query 8046 AATGGGTCAATTCCTAGG-TTACCCTAACCTTATTAGCCGAACTCACGAATTCTTCGAAA 8104 ||||| |||| | || ||||| | ||| || || || || | || || || Sbjct 8611 GATGGGGAAATTTTTTGGATTACCAGCA-CTTTTTTCTCGTACACATCAGTTTTT--TAA 8667 Query 8105 GG--AGTTTAATTTACCATGGCGGGAGAACAGACCTAATGAGGATCGTCAATGGTGAAGT 8162 || |||||| |||| | | ||| | ||| |||||| ||| |||| | Sbjct 8668 GGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATGA------TCA---GTGATGG 8718 Query 8163 AGAAA-ATAATTC---------GGATATCCGAGTATGTTGGAATGGACAGAAAGGAGGTC 8212 ||||| || || | |||||| | || ||||||||||||||| |||||| | Sbjct 8719 AGAAACATTATACTCGAAGGAAGGATAT-TGGGTCTGTTGGAATGGACAGCTAGGAGGGC 8777 Query 8213 TGGAAGGATTGAGACAGAAAGGTTGGAGCATTCTAAACCTTCTA 8256 | |||||| | |||||| | || ||||| || ||||||| ||| Sbjct 8778 TCGAAGGACTCAGACAGTACGGGTGGAGTATATTAAACCTCCTA 8821 Score = 102 bits (112), Expect = 7e-18 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 7790 GATTCTTCTCTCTTATGTCGTGGCAACTCAGGGATTACTTTGTAATAACCGAATATTTGA 7849 |||| ||||| |||||||| ||| |||| | | |||||||| || || |||||| | | Sbjct 21152 GATTTTTCTCGCTTATGTCTTGGGAACTACGTAAGTACTTTGTGATCACGGAATATCTAA 21211 Query 7850 TCAAGCAACACTTTGTCCCATTATTCGACGGTTTGACTATGGCAGATGATCTCACGACTG 7909 |||| || ||| ||| || | || | || || ||||||||||| || | || || | Sbjct 21212 TCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCAGACAATATGACTACAG 21271 Query 7910 TTATCAAGAAAATGATGGACAACGCAAATGGTCAAGGATTAGATACCTATGATTATATAT 7969 |||| ||||||||||| |||| | | |||||| | | ||| | || Sbjct 21272 TTATAAAGAAAATGATAGACAGTTCTCTAGAACAAGGACTCACTGACTACTCCCAGATCA 21331 Query 7970 CCATAGCCAATCATATAGATTATGAAAAGTGGAATAATCATCAGAG 8015 | || || ||||| || || ||||| || |||||||| ||||| || Sbjct 21332 CAATCGCAAATCACATTGACTATGAGAAATGGAATAACCATCAAAG 21377 Score = 98.7 bits (108), Expect = 8e-17 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 7769 GAGAAATCAAGAAAGACGGGAGATTCTTCTCTCTTATGTCGTGGCAACTCAGGGATTACT 7828 ||||| |||| | | || |||| ||||| |||| ||| ||| |||| | || |||| Sbjct 37914 GAGAAGTCAAAATATCTGGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTACT 37973 Query 7829 TTGTAATAACCGAATATTTGATCAAGCAACACTTTGTCCCATTATTCGACGGTTTGACTA 7888 |||| || || |||||| | ||||| || ||| ||| || | || | || || |||| Sbjct 37974 TTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTA 38033 Query 7889 TGGCAGATGATCTCACGACTGTTATCAAGAAAATGATGGACA 7930 |||| || || | || ||||| |||||||||||||| |||| Sbjct 38034 TGGCCGACAATATGACCACTGTCATCAAGAAAATGATTGACA 38075 >seq283 Length=322283 Score = 134 bits (148), Expect = 1e-27 Identities = 250/362 (69%), Gaps = 4/362 (1%) Strand=Plus/Plus Query 7742 TAATCATTGGATTAAAGGAGAAAGAGCGAGAAATCAAGAAAGACGGGAGATTCTTCTCTC 7801 |||| || |||| || | |||||| ||||||||| ||||||| | |||| | |||| Sbjct 271946 TAATAATATGATTGAAAGGGAAAGAAAGAGAAATCA-GAAAGACAGACGATTTCT-TCTC 272003 Query 7802 TTATGTCGTGGCAACTCAGGGATTACTTTGTAATAACCGAATATTTGATCAAGCAACACT 7861 || |||| ||| | ||||| || || ||||| ||||| ||| | || ||| | | Sbjct 272004 TT-TGTCTTGGACCTTGAGGGAATATTTCGTAATTACCGAGTATCTCATTAAGATGGAGT 272062 Query 7862 TTGTCCCATTATTCGACGGTTTGACTATGGCAGATGATCTCACGACTGTTATCAAGAAAA 7921 ||| || | ||| | | |||| | ||| |||||| | || | ||| | ||||||| Sbjct 272063 ATGTTCCTCTCTTCCATGTTTTGCC-ATGAAAGATGACATGACATCAGTTGTAAAGAAAA 272121 Query 7922 TGATGGACAACGCAAATGGTCAAGGATTAGATACCTATGATTATATATCCATAGCCAATC 7981 ||||||||| | | || |||||| |||||| ||| | || | || || || | Sbjct 272122 TGATGGACAGTACCATAGGACAAGGACTAGATAACTACAAGCATGTTGGAATTGCTAACC 272181 Query 7982 ATATAGATTATGAAAAGTGGAATAATCATCAGAGGAAAGAATCCACTACCCCAGTATTTA 8041 | || ||||| ||||| |||||||| ||||| || | || | | || ||||| || | Sbjct 272182 ACATCGATTACGAAAATTGGAATAAACATCAAAGAATTAAAGCTAATAAACCAGTGTTCA 272241 Query 8042 AGGTAATGGGTCAATTCCTAGGTTACCCTAACCTTATTAGCCGAACTCACGAATTCTTCG 8101 | ||||||||| ||||| | || | |||| || | || || || ||||||||| Sbjct 272242 ATGTAATGGGTAAATTCTTTGGATTGGCTAATCTGTTCTACCAGACCCATGAATTCTTCC 272301 Query 8102 AA 8103 || Sbjct 272302 AA 272303 Score = 107 bits (118), Expect = 2e-19 Identities = 193/281 (69%), Gaps = 1/281 (0%) Strand=Plus/Plus Query 7863 TGTCCCATTATTCGACGGTTTGACTATGGCAGATGATCTCACGACTGTTATCAAGAAAAT 7922 |||||| | ||| | |||||||| ||||||||||| | || | ||| | |||||||| Sbjct 273423 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGACATCAGTTGTAAAGAAAAT 273482 Query 7923 GATGGACAACGCAAATGGTCAAGGATTAGATACCTATGATTATATATCCATAGCCAATCA 7982 ||||| || | | || |||||| ||| || ||| || | | || || || || Sbjct 273483 GATGGGCAGTACCATAGGACAAGGACTAGGTAACTACGAGCAGGTTGGAATTGCTAACCA 273542 Query 7983 TATAGATTATGAAAAGTGGA-ATAATCATCAGAGGAAAGAATCCACTACCCCAGTATTTA 8041 || ||||| ||||| | || | |||| ||||||| ||||| | | ||||| || | Sbjct 273543 CATCGATTACGAAAAATAGATAAAATCTGCAGAGGATTGAATCTAATGAACCAGTGTTCA 273602 Query 8042 AGGTAATGGGTCAATTCCTAGGTTACCCTAACCTTATTAGCCGAACTCACGAATTCTTCG 8101 | ||||||||||||| | | | | |||||| | ||| || | ||||||||| Sbjct 273603 AAGTAATGGGTCAATCCTTTAGATTGGTTAACCTGTTCTGCCAGACCAATGAATTCTTCC 273662 Query 8102 AAAGGAGTTTAATTTACCATGGCGGGAGAACAGACCTAATG 8142 || || || || ||| | | ||| |||||||||||| Sbjct 273663 AACAAAGCTTTATATACTACAAAGAGAGGACAGACCTAATG 273703 Score = 95.1 bits (104), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 7863 TGTCCCATTATTCGACGGTTTGACTATGGCAGATGATCTCACGACTGTTATCAAGAAAAT 7922 |||||| | ||| | |||||||| ||||||||||| | | | ||| | || ||||| Sbjct 292276 TGTCCCTCTCTTCCATGGTTTGACCATGGCAGATGACATGAAATCAGTTGTAAA-AAAAT 292334 Query 7923 GATGGACAACGCAAATGGTCAAGGATTAGATACCTATGATTATATATCCATAGCCAATCA 7982 ||||| || | | || |||||| ||| || ||| || || | || || || || Sbjct 292335 GATGGGCAGTACCACAGGACAAGGACTAGGTAACTACGAGCATGTTGGAATTGCTAACCA 292394 Query 7983 TATAGATTATGAAAAGTGGAATAATCATCAGAGGAAAGAATCCACTACCCCAGTATTTAA 8042 || ||||| ||||| ||||| |||| ||||||| |||| | | ||||| || || Sbjct 292395 CATCGATTACGAAAAATGGAACAATCTGCAGAGGATTTAATCTAATGAACCAGTGTTCAA 292454 Query 8043 GGTAATGGGTCAAT 8056 ||||||||||||| Sbjct 292455 AGTAATGGGTCAAT 292468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40340939159820