Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031301.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq1383 118 8e-23 >seq1383 Length=104272 Score = 118 bits (130), Expect = 8e-23 Identities = 179/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 6292 AAAGGAACGTGAAGTTAAGAAAAAAGGTCGTTTCTTTTCTCTAATGTCATGGATGTTGCG 6351 ||||||| ||||| || | | || || || || || || ||||| ||| | || Sbjct 21123 AAAGGAAAAGGAAGTCAAAATATCTGGACGATTTTTCTCGCTTATGTCTTGGGAACTACG 21182 Query 6352 AGAATATTTTGTGATAACAGAATATTTAATCAAGGAGAATTACGTTCCTCTGTTTAGTGG 6411 | || |||||||| || |||||| ||||||| || | || || || ||||||| || Sbjct 21183 TAAGTACTTTGTGATCACGGAATATCTAATCAAAGAATACTATGTACCGCTGTTTAAAGG 21242 Query 6412 ATTGACAATGGCTGATGATTTGACAACTGTCATATCAAAATTGTTAGATAGGAGTCAGGG 6471 || || ||||| || || |||| || || ||| ||| || |||| || || | Sbjct 21243 GTTAACTATGGCAGACAATATGACTACAGTTATAAAGAAAATGATAGACAGTTCTCTAGA 21302 Query 6472 ACAAGGTGGTAAAGATTACACTAATATTTGTATCGCAAATCATATTGACTATGAGAAATG 6531 |||||| | || ||| | | || ||||||||||| ||||||||||||||||| Sbjct 21303 ACAAGGACTCACTGACTACTCCCAGATCACAATCGCAAATCACATTGACTATGAGAAATG 21362 Query 6532 GAACAACCATCAAAG 6546 ||| ||||||||||| Sbjct 21363 GAATAACCATCAAAG 21377 Score = 109 bits (120), Expect = 4e-20 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 6317 GGTCGTTTCTTTTCTCTAATGTCATGGATGTTGCGAGAATATTTTGTGATAACAGAATAT 6376 || || || || || || | ||| ||| | || || || |||||||| || |||||| Sbjct 37931 GGACGATTTTTCTCGCTTAGGTCTTGGGAACTACGTGAGTACTTTGTGATCACGGAATAT 37990 Query 6377 TTAATCAAGGAGAATTACGTTCCTCTGTTTAGTGGATTGACAATGGCTGATGATTTGACA 6436 ||||||| || | || || || ||||||| || || || ||||| || || |||| Sbjct 37991 CTAATCAAAGAATACTATGTACCGCTGTTTAAAGGGTTAACTATGGCCGACAATATGACC 38050 Query 6437 ACTGTCATATCAAAATTGTTAGATAGGAGTCAGGGACAAGGTGGTAAAGATTACACTAAT 6496 |||||||| ||| || | || || || ||||||| | | || || | | Sbjct 38051 ACTGTCATCAAGAAAATGATTGACAGATCTCTGGGACAATGCCTCACGGACTATTCACAA 38110 Query 6497 ATTTGTATCGCAAATCATATTGACTATGAGAAATGGAACAACCATCAAAG 6546 || |||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct 38111 ATCACAATCGCAAACCATATCGACTATGAGAAGTGGAACAACCATCAAAG 38160 Score = 100 bits (110), Expect = 2e-17 Identities = 236/353 (67%), Gaps = 4/353 (1%) Strand=Plus/Plus Query 6323 TTCTTTTCTCTAATGTCATGGATGTTGCGAGAATATTTTGTGATAACAGAATATTTAATC 6382 ||||| ||| | ||||| ||| | ||||||| ||||| || ||||| || | ||| Sbjct 8357 TTCTTCTCTTTGATGTCGTGGGAACTCAGAGAATACTTTGTCATCACAGAGTACCTGATC 8416 Query 6383 AAGGAGAATTACGTTCCTCTGTTTAGTGGATTGACAATGGCTGATGATTTGACAACTGTC 6442 || || |||| || || || || | || || |||||||| || | |||| || || Sbjct 8417 AAAGAATATTATGTACCACTTTTCAAAGGCTTAACAATGGCGGACAACATGACCACCGTG 8476 Query 6443 ATATCAAAATTGTTAGATAGGAGTCAGGGACAAGGTGGTAAAGATTACACTAATATTTGT 6502 || || || ||||||| | |||||| || | || ||| | | || Sbjct 8477 ATCAAGAAGATGATAGATAGCTCCCTGGGACAGGGATTAACTGACTACTCCCAAATCGCA 8536 Query 6503 ATCGCAAATCATATTGACTATGAGAAATGGAACAACCATCAAAGAAAAGCTGCAACTGAT 6562 || || || || || || ||||| ||||||||||| || |||||| | | |||| | Sbjct 8537 ATTGCCAACCACATCGATTATGAAAAATGGAACAATCACCAAAGATATGACTCAACAGCC 8596 Query 6563 CCAGTTTTCAAGGTCATGGGAGAGTTCTTAGGATATCCCA--ACTTATTCACAAGAACTC 6620 || || |||| || ||||| | || || |||| | ||| |||| || | | || | Sbjct 8597 CCTGTATTCACTGTGATGGGGAAATTTTTTGGAT-TACCAGCACTT-TTTTCTCGTACAC 8654 Query 6621 ACGAATTCTTTCAAGAAAGTCTAATTTACTACAATGGACGACCAGATTTGATG 6673 | | || ||| | |||||| || |||| ||||||| | |||| || || ||| Sbjct 8655 ATCAGTTTTTTAAGGAAAGTTTAGTTTATTACAATGAAAGACCCGACTTAATG 8707 Score = 78.8 bits (86), Expect = 7e-11 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 6939 ATTCCATTATGAATGCAATACAGAATGGAACCAATAAACTAGGCTTAATTATTAATGAGG 6998 || |||| ||||||||| || ||||||| || || |||| ||||| || ||| | Sbjct 8973 ATGCCATCATGAATGCAGTAGTCGATGGAACAAAGAAGTTAGGATTAATCATCAATAAAC 9032 Query 6999 ATGAAACTATACAATCAGCTGATTATTTAAATTATGGAAAGATACC 7044 |||||| ||||||||||| |||||| | |||||||| || |||| Sbjct 9033 GTGAAACCATACAATCAGCAGATTATATGAATTATGGCAAAGTACC 9078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35390659824156