Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priapulus_20caudatus_20[refseq_20GCF_5F000485595.1_202015-11-19] 59,587 sequences; 511,738,253 total letters Query= NC_031690.1 Length=11308 Score E Sequences producing significant alignments: (Bits) Value seq1383 131 1e-26 seq283 84.2 2e-12 >seq1383 Length=104272 Score = 131 bits (144), Expect = 1e-26 Identities = 210/298 (70%), Gaps = 8/298 (3%) Strand=Plus/Minus Query 4600 TTGATGGTTATTCCATTTGCTATAATCAAAGTGATTGGCGATACAGATGTTCTCGTACCC 4659 |||||||||||||||||| ||| |||| |||||| ||||| ||| | ||| Sbjct 21375 TTGATGGTTATTCCATTTCTCATAGTCAATGTGATTTGCGATTGTGATCTGGGAGTAG-- 21318 Query 4660 TTCACT---TCCTTGACCTGAAGTTGTATCCATCATTTTCTTTATGACGGTAGTCATATC 4716 ||| | |||||| || || | || |||||||||||||| || |||||||||| Sbjct 21317 -TCAGTGAGTCCTTGTTCTAGAGAACTGTCTATCATTTTCTTTATAACTGTAGTCATATT 21259 Query 4717 ATCTGCCATAGTTAGTCCTTTAAACAATGGAACAAAGTGAGTCTT-GATTAGGTGTTCTG 4775 ||||||||||||| |||||||||| || ||| ||| | |||| |||||| | ||| | Sbjct 21258 GTCTGCCATAGTTAACCCTTTAAACAGCGGTACATAGT-ATTCTTTGATTAGATATTCCG 21200 Query 4776 TTATTACAAAATACTCTCGTAAAGCCCAGGTCAATAGAGCATAAAATCTTCCTCCAATCT 4835 | || ||||| |||| |||| |||| | || || | |||||| ||| || | Sbjct 21199 TGATCACAAAGTACTTACGTAGTTCCCAAGACATAAGCGAGAAAAATCGTCCAGATATTT 21140 Query 4836 TGATCTCTCGCTCTTTTCCTTTAAGTCCTATGATGAGATCCTCAAGAGTTAGTCCATT 4893 ||| || || ||| || | ||||| || | || || || | ||||||||||| Sbjct 21139 TGACTTCCTTTTCCTTTGCTCTTAGTCCGATTACAAGTTCTTCCTGGGTTAGTCCATT 21082 Score = 93.3 bits (102), Expect = 3e-15 Identities = 90/113 (80%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 4685 TCCATCATTTTCTTTATGACGGTAGTCATATCATCTGCCATAGTTAGTCCTTTAAACAAT 4744 || ||||||||||| ||||| || ||||||| || |||||||||| |||||||||| Sbjct 38073 TCAATCATTTTCTTGATGACAGTGGTCATATTGTCGGCCATAGTTAACCCTTTAAACAGC 38014 Query 4745 GGAACAAAGTGAGTC-TTGATTAGGTGTTCTGTTATTACAAAATACTCTCGTA 4796 || ||| ||| | || |||||||| | ||| || || ||||| ||||| |||| Sbjct 38013 GGTACATAGT-ATTCTTTGATTAGATATTCCGTGATCACAAAGTACTCACGTA 37962 >seq283 Length=322283 Score = 84.2 bits (92), Expect = 2e-12 Identities = 239/362 (66%), Gaps = 4/362 (1%) Strand=Plus/Minus Query 4514 AAGAATTCATGAGTTCGAGATATTAGTTTTGGATACCCAAGAAACTTTCCCATCACATCA 4573 ||||||||||| || | | | || || | | |||| || || ||||| |||| Sbjct 272299 AAGAATTCATGGGTCTGGTAGAACAGATTAGCCAATCCAAAGAATTTACCCATTACATTG 272240 Query 4574 AATACAGGATTATTGGCTTTGGCTCGTTGATGGTTATTCCATTTGCTATAATCAAAGTGA 4633 || || || ||||| ||||| || |||||| |||||||| || ||||| | ||| Sbjct 272239 AACACTGGTTTATTAGCTTTAATTCTTTGATGTTTATTCCAATTTTCGTAATCGATGTGG 272180 Query 4634 TTGGCGATACAGATGTTCTCGTACCCTTCACTTCCTTGACCTGAAGTTGTATCCATCATT 4693 || || || | | | || ||| || |||||| ||| || | ||||||||| Sbjct 272179 TTAGCAATTCCAACATGCTTGTAGTTATCTAGTCCTTGTCCTATGGTACTGTCCATCATT 272120 Query 4694 TTCTTTATGACGGTAGTCATATCATCTGCCATAGTTAGTCCTTTAAACAATGGAACAAAG 4753 ||||||| || | ||||| |||||| ||| | | | | || | |||||| | Sbjct 272119 TTCTTTACAACTGATGTCATGTCATCTTTCAT-GGCAAAACATGGAAGAGAGGAACATAC 272061 Query 4754 TGAGTCTTGATTAGGTGTTCTGTTATTACAAAATACTCTCGTAAAGCCCAGGTCAATAGA 4813 | |||| || || | || || ||||| ||||| || | || | ||| | ||| ||| Sbjct 272060 TCCATCTTAATGAGATACTCGGTAATTACGAAATATTCCCTCAAGGTCCAAGACAA-AGA 272002 Query 4814 GCATAAAATCTTCCTCCAATCTTGATCTCTCGCTCTTTTCCTTTAAGTCCTATGATGAGA 4873 | | ||||| || | || |||| |||| ||||| ||||| | || ||| || || Sbjct 272001 G-AAGAAATCGTCTGTCTTTC-TGATTTCTCTTTCTTTCCCTTTCAATCATATTATTAGT 271944 Query 4874 TC 4875 || Sbjct 271943 TC 271942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36046220072096