Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq2143 95.1 1e-15 >seq2143 Length=197386 Score = 95.1 bits (104), Expect = 1e-15 Identities = 121/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||| | || || ||||| || |||||| ||| ||| | | ||||||||| || || | Sbjct 69965 AGGCGATTCGAGATGGATCGTGAACCTGCCGAG-GCCCGGTTCTGTGCTGAATGCAACCG 69907 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 ||| |||||||| || ||| | ||||| ||||| |||||||||||||| || Sbjct 69906 TTGCCATAGCGCTGAGGAGGGGGACCTGTGGGCCGAGTCCAGCATGTTGGGCCTTCGCAT 69847 Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||| |||||||| ||||| || |||||||| ||||| |||| Sbjct 69846 CACTTACTTTGCATGTATGGACGGGAAGGTGTACGATATTACAG 69803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40197441436336