Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_007652.1 Length=14071 Score E Sequences producing significant alignments: (Bits) Value seq945 82.4 7e-12 >seq945 Length=260924 Score = 82.4 bits (90), Expect = 7e-12 Identities = 245/356 (69%), Gaps = 34/356 (10%) Strand=Plus/Plus Query 6603 ACCACAACACAAGCAACTGCA-CAACTGA--CAACACCAACAGCCCCAAAAGCAAGCATA 6659 || |||||| | |||| ||| |||| | ||||| ||||| | ||| | ||| | | Sbjct 15039 ACAACAACAACAACAACAGCAACAACAGCAGCAACAACAACAACAACAACAACAACGACA 15098 Query 6660 GCACCCAAGAACAGACAGGCAACAACCaaaaaaaCCGAAACGGGCACCacaacaacaagc 6719 ||| | || ||||| | ||||||| | || ||| | ||| || ||| |||||| Sbjct 15099 GCAAC-AACAACAGCAA--CAACAACAACAACAACAGCAACA---ACAACAGCAACAATA 15152 Query 6720 agagca----aagaaaaccaacaacc-caacagagacagcaacaacaactctcaaagcaa 6774 | |||| || || | ||||||| ||||| |||||| ||||||| | ||||| Sbjct 15153 ACAGCANAACAACAACAGCAACAACAACAACAACAACAGCAGCAACAACAACAACAGCAA 15212 Query 6775 caacagaaacaggcaagggcaaagaGGGGCCAACA-CAGCACACAATCA-AAGAACAGCC 6832 ||||| ||||| ||| || || ||||| ||||| ||| | || |||||| Sbjct 15213 CAACAACAACAG-CAAC----AACAG----CAACAGCAGCAG-CAACAACAACAACAGCA 15262 Query 6833 CGAAACAACAGCAGGAGAAACAACTACCCCA-CAGTCAAGAAGAACAACCAGC-AGGCCA 6890 || ||||||||| || |||||| || || ||| ||| || ||||| |||| | || Sbjct 15263 ACAA-CAACAGCAGCAGCAACAACAACAACAGCAG-CAACAACAACAA-CAGCAACAACA 15319 Query 6891 GCCCCAACAACAAAAACCGAAG-AGGAG--GCAGAAACCACCAAAACAAGAACAAC 6943 || ||||| ||| ||| | || || || |||| ||| || | ||||| |||||| Sbjct 15320 GCAACAACAGCAACAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAAC 15375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 44893007287188