Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq1103 109 3e-21 seq240 107 1e-20 seq2533 89.7 3e-15 >seq1103 Length=227817 Score = 109 bits (120), Expect = 3e-21 Identities = 82/91 (90%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| Sbjct 193411 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCGCGCGCGCTCAAGCTCCACCTCC 193470 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||||||||| |||| || || |||||||||| Sbjct 193471 CCGACGCGG-CGGG-CG-AG-ACGGGCCGGT 193497 >seq240 Length=604172 Score = 107 bits (118), Expect = 1e-20 Identities = 65/69 (94%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 172677 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCGCATGCGCTCAAGCTCCACCTCC 172618 Query 897 CCGACGCGG 905 ||||| ||| Sbjct 172617 CCGACACGG 172609 >seq2533 Length=89611 Score = 89.7 bits (98), Expect = 3e-15 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||| Sbjct 20502 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTATCGCACGCACTCAAGCTCCACCTCC 20561 Query 897 CCGA 900 | || Sbjct 20562 CAGA 20565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2859902726172