Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq1131 107 2e-19 >seq1131 Length=1126809 Score = 107 bits (118), Expect = 2e-19 Identities = 126/165 (76%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| |||| || ||||| || |||||| ||| || | | ||||||||| || || | Sbjct 114231 AGGCGGTTCGAGATGGATCGTGAACCTGCTGAG-GCTCGGTTCTGTGCTGAATGCAACCG 114289 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| || |||||||| ||| | ||||| ||||| |||||||||||||| || Sbjct 114290 TTGCCATAGCGCCGAGGAAGGGGACCTGTGGGCTGAGTCCAGCATGTTGGGCCTACGCAT 114349 Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| ||| |||||||| |||||||||||||| |||| Sbjct 114350 CACATACTTTGC-CTGTATGGATGGCAAGGTGTATGATATTACAG 114393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40115404509516