Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq6966 98.7 8e-17 >seq6966 Length=49782 Score = 98.7 bits (108), Expect = 8e-17 Identities = 123/166 (74%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 5017 GCATAGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTA 5075 ||| ||| |||| || ||||| ||||| || | ||| || | | ||| || ||||| | Sbjct 3271 GCACAGGCGGTTCGAGATGGAGCGGGACCCGAGCGAG-GCGCGCTTCTGCGCCGAGTGCA 3329 Query 5076 ATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCA 5135 | | || ||| ||| ||||| || ||||| ||||| ||||| ||| || ||||||| Sbjct 3330 ACAAGCGGCACGGTGCGGAGGAGGGCGACTTCTGGGCCGAGTCCAGCCTGCTGGGCCTGC 3389 Query 5136 AAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCAC 5181 ||||||||||| || | ||||| || |||||||| || ||||| Sbjct 3390 GCATCACCTACTTCGCCTTCATGGACGGGAAGGTGTACGACATCAC 3435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40082650443612