Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Austrofundulus_20limnaeus_20[refseq_20GCF_5F001266775.1_202015-07- 28] 29,785 sequences; 866,963,281 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq699 96.9 2e-17 >seq699 Length=227582 Score = 96.9 bits (106), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||| Sbjct 133494 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACTATCGCGCGCGCTCTGGCTCCACCTCT 133435 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 |||||| || |||| || || |||||||||| Sbjct 133434 CCGACG-GGGCGGG-CG-AG-ACGGGCCGGT 133408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2859921282930