Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq11 91.5 1e-14 >seq11 Length=20528231 Score = 91.5 bits (100), Expect = 1e-14 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| ||||||| ||||| || || || ||| ||| | | |||||| || || || | Sbjct 4699842 AGGCGGTTTGAGATGGATCGTGATCCAGCTGAG-GCCCGTTTCTGTGCCGAATGCAACCG 4699784 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| ||| ||||| || ||| ||||||| ||||| |||||||||||| | || Sbjct 4699783 TTGCCATAGTGCCGAGGAGGGAGACCTTTGGGCTGAGTCCAGCATGTTGGGCTTACGCAT 4699724 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 |||||||||||| ||||| || || || |||||||| |||| Sbjct 4699723 CACCTACTTTGCATGTATGGACGGCAAAGTCTATGATATTACAG 4699680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40105021165524