Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq527 87.8 1e-14 >seq527 Length=1699385 Score = 87.8 bits (96), Expect = 1e-14 Identities = 76/91 (84%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| |||||| ||||||||| | Sbjct 1254985 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGCGCGCTCTAGCTCCACCTGC 1254926 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| || || || |||||||||| Sbjct 1254925 CCG--GCGGTGCGGGCG-AG-ACGGGCCGGT 1254899 Score = 87.8 bits (96), Expect = 1e-14 Identities = 76/91 (84%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||| | | ||| |||||| ||||||||| | Sbjct 1607564 CTGCCCAGGCATAGTTCACCATCTTTCGGGTACCATCGCGCGCGCTCTAGCTCCACCTGC 1607505 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| || || || |||||||||| Sbjct 1607504 CCG--GCGGTGCGGGCG-AG-ACGGGCCGGT 1607478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860523330244