Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fundulus_20heteroclitus_20[refseq_20GCF_5F000826765.1_202015-01-21] 10,180 sequences; 1,021,898,560 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq10129 91.5 1e-14 >seq10129 Length=1043175 Score = 91.5 bits (100), Expect = 1e-14 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||| |||| || ||||||||||| || ||| | | |||||| ||||| | | Sbjct 972779 AGGCGGTTCGAGATGGACCGGGATCCCGCCGAAGCCCGCTTCTGTGCCGAGTGCAGCCGT 972838 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 ||| || ||||| || ||| | ||||| ||||| |||||| ||||| | ||| Sbjct 972839 TGCCATGGCGCCGAGGAGGGAGACCTGTGGGCGGAGTCCAGCATGCTGGGCTTACGCATC 972898 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 || |||||||| ||||| |||||||||||||||||||||| Sbjct 972899 ACGTACTTTGCTTGCATGGAAGGAAAGGTGTATGATATCACAG 972941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40206594812320