Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gadus_20morhua_20[genbank_20GCA_5F000231765.1_202011-08-26] 427,427 sequences; 824,311,139 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq509 100 2e-17 >seq509 Length=588102 Score = 100 bits (110), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACC-TAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||| |||| ||||||||||| || || | ||| ||||| | |||| || || || | Sbjct 348888 AGGCGGTTCGAAATGGACCGTGAGCCTTCTGAG-GCCAGGTTTTGTGGCGAATGCAACCG 348830 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 | || |||||||| || ||| | ||||| ||||| |||||||| ||||| || Sbjct 348829 TTTCCACAGCGCTGAGGAGGGAGACCTGTGGGCTGAGTCCAGCATGTTAGGCCTACGGAT 348770 Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCA 5184 ||| |||||||| | |||||||| ||||| || || ||||||| ||| || |||| || Sbjct 348769 CACATACTTTGCCTTCATGGATGGCAAGGTCTACGACATCACAG-GTGAACTTGATGGCA 348711 Query 5185 G 5185 | Sbjct 348710 G 348710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40017842283448