Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haplochromis_20burtoni_20[refseq_20GCF_5F000239415.1_202011-12-22] 8,001 sequences; 831,411,547 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq67 104 2e-18 >seq67 Length=2271746 Score = 104 bits (114), Expect = 2e-18 Identities = 125/165 (76%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAA-GAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 ||| | || || ||||| || ||||| ||| ||| | | ||||||||| || ||| | Sbjct 914799 AGGCGCTTCGAGATGGATCGTGAACCCGCTGAG-GCCCGGTTCTGTGCTGAATGCAATCG 914741 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||| || |||||||| ||| | ||||| || ||||||||| ||||||| || Sbjct 914740 TTGCCATAGCGCCGAGGAAGGGGACCTGTGGGCTGAATCGAGCATGCTGGGCCTACGCAT 914681 Query 5140 CACCTACTTTGCGCTG-ATGGATGGAAAGGTGTATGATATCACAG 5183 ||| |||||||| ||| |||||||| |||||||||||||| |||| Sbjct 914680 CACATACTTTGC-CTGTATGGATGGCAAGGTGTATGATATTACAG 914637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40114788892668